Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_C01
         (863 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    28   0.11 
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    28   0.11 
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   3.1  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   3.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   4.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   7.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.4  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   9.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   9.4  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
 Frame = +1

Query: 367 RCPDNELFYPGHQKDD--WICDCRPANL 444
           +CPD+  FYP H   D  W CD   A L
Sbjct: 24  KCPDDFGFYPHHTSCDKYWKCDNNVAEL 51


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
 Frame = +1

Query: 367 RCPDNELFYPGHQKDD--WICDCRPANL 444
           +CPD+  FYP H   D  W CD   A L
Sbjct: 24  KCPDDFGFYPHHTSCDKYWKCDNNVAEL 51


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 489 SLSKSWPAFVCSWVI 445
           +L+K WP FV  W +
Sbjct: 104 NLAKRWPKFVKDWCV 118


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 489 SLSKSWPAFVCSWVI 445
           +L+K WP FV  W +
Sbjct: 104 NLAKRWPKFVKDWCV 118


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -1

Query: 281 ELFCAIDVTNNAHVRNIIFK*HILNSIT 198
           + F ++   +N  V+N  +K HI+ SIT
Sbjct: 555 QAFSSLKELSNHMVKNSHYKEHIMRSIT 582


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 490  PCEVGQYLVLPQN 528
            PCE GQY+  P N
Sbjct: 1102 PCEPGQYVPDPHN 1114


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 460 LFLGDIGSLVCNHKSSRLFGVPDRT 386
           L+L + GSLV N +   L   PD T
Sbjct: 426 LYLNNEGSLVYNVQIENLKTTPDNT 450


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 394  PGHQKDDWICDCRPANLYH 450
            PG Q +  +   RPA  YH
Sbjct: 950  PGDQTEAGVFTLRPATTYH 968


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -3

Query: 84  KTSTYIGSLWTTQILRNSL 28
           KT+T++  +W    L+N +
Sbjct: 347 KTATFVHEIWNKYALKNEV 365


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -3

Query: 84  KTSTYIGSLWTTQILRNSL 28
           KT+T++  +W    L+N +
Sbjct: 303 KTATFVHEIWNKYALKNEV 321


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,531
Number of Sequences: 336
Number of extensions: 4279
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23789590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)