Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_C01
         (863 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces pomb...    28   2.0  
SPBC2G2.17c |||beta-glucosidase Psu2 |Schizosaccharomyces pombe|...    27   3.4  
SPAC1F5.08c |yam8|ehs1|calcium transport protein|Schizosaccharom...    27   4.5  
SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier ...    27   4.5  
SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|...    26   6.0  
SPAC869.02c |||nitric oxide dioxygenase |Schizosaccharomyces pom...    26   7.9  

>SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 432

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 17/62 (27%), Positives = 27/62 (43%)
 Frame = +1

Query: 154 LYNKTNRYFKTRLLTVIEFKMCYLNIIFLTCALLVTSIAQNSSKDAIGFPEMEENPDLRN 333
           +Y+ TN   +TR +    FK C   I+F+        +   + ++AI   E   N DL  
Sbjct: 140 IYDATNGTRRTRRILYDRFKNCGFKILFIESLCNKEDVINANIQEAIHVSEEFRNWDLEM 199

Query: 334 KE 339
            E
Sbjct: 200 AE 201


>SPBC2G2.17c |||beta-glucosidase Psu2 |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 319

 Score = 27.1 bits (57), Expect = 3.4
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 130 SDRQEIKIMLSGLYLQNEYLYRKLVDNSNLKE 35
           S++ +  + + GLY +N  LY    DNSNL E
Sbjct: 124 SEQPDNGVSVGGLYCKNGKLYLTQKDNSNLCE 155


>SPAC1F5.08c |yam8|ehs1|calcium transport
           protein|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 486

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -1

Query: 338 SLFLKSGFSSISGNPIASFELFCAID 261
           + F++SG S++ GN + ++EL   ID
Sbjct: 128 NFFVESGESTLEGNNVINYELAAGID 153


>SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier for
           pyridoxine, pyridoxal, and pyridoxamine
           Bsu1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 526

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 332 FLKSGFSSISGNPIASFELFCAIDVTNNAHVRNIIF 225
           +L   +  +SG+ +A+F L   I  T  AHV  I+F
Sbjct: 438 YLTDSYPLLSGSAVAAFTLPSFIGATVFAHVSQIMF 473


>SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 570

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 10/40 (25%), Positives = 23/40 (57%)
 Frame = -3

Query: 510 ILSDFTWSLSKSWPAFVCSWVI*VRWSAITNPVVFLVSRI 391
           I+S   W  S+  P +  +W++ +  +    P+++LV+R+
Sbjct: 469 IISPQLWQ-SRDAPRYYPAWIVQIVVAWFVTPIIYLVARV 507


>SPAC869.02c |||nitric oxide dioxygenase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 427

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -2

Query: 634 INDYKELXIPIFHNSHSIELMYPCCKGFARKPELLNFVEELD 509
           + +Y E+ +P F+ +H I L  P    FA    LLN+ + +D
Sbjct: 62  LGNYPEV-LPYFNKAHQISLSQPRILAFA----LLNYAKNID 98


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,127,310
Number of Sequences: 5004
Number of extensions: 66432
Number of successful extensions: 150
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 150
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 430470850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)