Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_C01
         (863 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D89629-1|BAB46925.1|  815|Homo sapiens cerebral protein-12 protein.    38   0.036
D83018-1|BAA11681.1|  816|Homo sapiens nel-related protein 2 pro...    38   0.036
BC020544-1|AAH20544.1|  816|Homo sapiens NELL2 protein protein.        38   0.036
DQ098812-1|AAZ13740.1|  107|Homo sapiens immunoglobulin lambda l...    31   7.2  
AJ426384-1|CAD20005.1|   98|Homo sapiens immunoglobulin lambda l...    31   7.2  
AY942030-1|AAY33378.1|  110|Homo sapiens anti-rabies virus immun...    30   9.5  

>D89629-1|BAB46925.1|  815|Homo sapiens cerebral protein-12 protein.
          Length = 815

 Score = 38.3 bits (85), Expect = 0.036
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +1

Query: 409 DDWICDCRPANLYHPGTDKCWPAFRQGPC-EVG-QYLVLPQNSVIPVCEQNPCNTDTL 576
           D W+ +C+         D CWP     PC +V  ++ +LP+N   P C  +PC  DT+
Sbjct: 712 DTWVQNCQQCRCLQGEVD-CWPL----PCPDVECEFSILPENECCPRCVTDPCQADTI 764


>D83018-1|BAA11681.1|  816|Homo sapiens nel-related protein 2
           protein.
          Length = 816

 Score = 38.3 bits (85), Expect = 0.036
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +1

Query: 409 DDWICDCRPANLYHPGTDKCWPAFRQGPC-EVG-QYLVLPQNSVIPVCEQNPCNTDTL 576
           D W+ +C+         D CWP     PC +V  ++ +LP+N   P C  +PC  DT+
Sbjct: 713 DTWVQNCQQCRCLQGEVD-CWPL----PCPDVECEFSILPENECCPRCVTDPCQADTI 765


>BC020544-1|AAH20544.1|  816|Homo sapiens NELL2 protein protein.
          Length = 816

 Score = 38.3 bits (85), Expect = 0.036
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +1

Query: 409 DDWICDCRPANLYHPGTDKCWPAFRQGPC-EVG-QYLVLPQNSVIPVCEQNPCNTDTL 576
           D W+ +C+         D CWP     PC +V  ++ +LP+N   P C  +PC  DT+
Sbjct: 713 DTWVQNCQQCRCLQGEVD-CWPL----PCPDVECEFSILPENECCPRCVTDPCQADTI 765


>DQ098812-1|AAZ13740.1|  107|Homo sapiens immunoglobulin lambda
           light chain variable region protein.
          Length = 107

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = -1

Query: 488 PCRKAGQHLSVPG*YRFAGLQSQIQSSFWCPG*NNSLSGHLAGMNT 351
           P R +G           AGLQ++ +  ++C   +NSLSG L G  T
Sbjct: 57  PNRFSGAKSGTSASLAIAGLQAEDEGDYYCQSYDNSLSGSLFGGGT 102


>AJ426384-1|CAD20005.1|   98|Homo sapiens immunoglobulin lambda
           light chain variable region protein.
          Length = 98

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -1

Query: 488 PCRKAGQHLSVPG*YRFAGLQSQIQSSFWCPG*NNSLSGHLAGMNTGW 345
           P R +G           +GLQS  ++ ++C   ++SLSG + G  T W
Sbjct: 49  PDRFSGSKSGTSASLAISGLQSDDEADYYCAAWDDSLSGPVFGGGTQW 96


>AY942030-1|AAY33378.1|  110|Homo sapiens anti-rabies virus
           immunoglobulin light chain variable region protein.
          Length = 110

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = -1

Query: 488 PCRKAGQHLSVPG*YRFAGLQSQIQSSFWCPG*NNSLSGHLAGMNT 351
           P R +G           +GLQS+ ++ ++C   ++SLSG++ G  T
Sbjct: 60  PDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLSGYVFGTGT 105


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,383,884
Number of Sequences: 237096
Number of extensions: 2308032
Number of successful extensions: 10494
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10492
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)