Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_B24
         (880 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000519CF2 Cluster: PREDICTED: similar to CG1943-PA,...    40   0.063
UniRef50_UPI0000D576B6 Cluster: PREDICTED: similar to CG1943-PA,...    38   0.44 
UniRef50_A2I480 Cluster: Putative uncharacterized protein; n=1; ...    37   0.78 
UniRef50_UPI0000E80C4D Cluster: PREDICTED: hypothetical protein;...    33   7.2  
UniRef50_A3I905 Cluster: Putative uncharacterized protein; n=3; ...    33   7.2  
UniRef50_A2QNV1 Cluster: Function: pmp1 of S. pombe has an essen...    33   7.2  

>UniRef50_UPI0000519CF2 Cluster: PREDICTED: similar to CG1943-PA,
           isoform A isoform 2; n=1; Apis mellifera|Rep: PREDICTED:
           similar to CG1943-PA, isoform A isoform 2 - Apis
           mellifera
          Length = 133

 Score = 40.3 bits (90), Expect = 0.063
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = +1

Query: 439 SSPGXEAPKRVRVPPGGFSSGLW 507
           +SP  + P R RVPPGG+SSGLW
Sbjct: 111 TSPAAKVPARTRVPPGGYSSGLW 133


>UniRef50_UPI0000D576B6 Cluster: PREDICTED: similar to CG1943-PA,
           isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG1943-PA, isoform A - Tribolium castaneum
          Length = 90

 Score = 37.5 bits (83), Expect = 0.44
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = +1

Query: 454 EAPKRVRVPPGGFSSGLW 507
           E  +RVRVPPGGFSSGLW
Sbjct: 73  ENQRRVRVPPGGFSSGLW 90


>UniRef50_A2I480 Cluster: Putative uncharacterized protein; n=1;
           Maconellicoccus hirsutus|Rep: Putative uncharacterized
           protein - Maconellicoccus hirsutus (hibiscus mealybug)
          Length = 152

 Score = 36.7 bits (81), Expect = 0.78
 Identities = 15/21 (71%), Positives = 15/21 (71%)
 Frame = +1

Query: 445 PGXEAPKRVRVPPGGFSSGLW 507
           P   A  R RVPPGGFSSGLW
Sbjct: 132 PATNAAPRQRVPPGGFSSGLW 152


>UniRef50_UPI0000E80C4D Cluster: PREDICTED: hypothetical protein;
           n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
           - Gallus gallus
          Length = 222

 Score = 33.5 bits (73), Expect = 7.2
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +3

Query: 165 QGCSAPPXGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEXKATNGTS 320
           +GC  PP GG   +    P P    +R  P SA+   S G G + + T  +S
Sbjct: 80  RGCPDPPAGGSPQMALRSPPPQLPHKRTRPLSASQNGSGGCGSKRRLTESSS 131


>UniRef50_A3I905 Cluster: Putative uncharacterized protein; n=3;
            Bacillus|Rep: Putative uncharacterized protein - Bacillus
            sp. B14905
          Length = 1018

 Score = 33.5 bits (73), Expect = 7.2
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 210  DSEPEPPRTGRRAVPPSATSTFSHGQGDEXKAT-NGTSVATNGQST 344
            D EP+P   G+  +PP+   T  +G G+    + NG     NG  +
Sbjct: 913  DDEPDPEDNGQETIPPTTPPTNGNGSGNNGNGSGNGNGSGGNGNGS 958


>UniRef50_A2QNV1 Cluster: Function: pmp1 of S. pombe has an
           essential function in Cl-homeostasis; n=1; Aspergillus
           niger|Rep: Function: pmp1 of S. pombe has an essential
           function in Cl-homeostasis - Aspergillus niger
          Length = 665

 Score = 33.5 bits (73), Expect = 7.2
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +3

Query: 213 SEPEPPRTGRRAVPPSATSTFSHGQGD-EXKATNGTSVAT 329
           SEP+PP+T R  +  ++T  F  G  D E  ++NG S A+
Sbjct: 482 SEPQPPQTARTDISEASTPGFMSGSSDAEQASSNGLSQAS 521


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 747,486,329
Number of Sequences: 1657284
Number of extensions: 14139057
Number of successful extensions: 45498
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 41296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45415
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)