Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_B23
         (913 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0347 - 29440541-29440664,29440908-29441020,29441522-294416...   185   4e-47
10_08_0945 - 21738643-21738760,21740056-21740287,21740582-217406...   181   8e-46
07_03_0445 - 18281715-18281832,18282274-18282505,18283486-182835...   178   4e-45
12_02_0695 + 22220054-22220056,22221226-22221276,22221415-222215...   175   5e-44
06_01_0900 + 6926600-6927202                                           28   9.0  

>05_07_0347 -
           29440541-29440664,29440908-29441020,29441522-29441689,
           29442341-29442391,29442518-29442555,29442885-29442978
          Length = 195

 Score =  185 bits (451), Expect = 4e-47
 Identities = 85/151 (56%), Positives = 103/151 (68%)
 Frame = +2

Query: 128 AEQRERTFIMVKPDGVQRGLVGTIIERFEXXXXXXXXXXXVWPSXELLQQHYSDLASRPF 307
           A + ERTFI +KPDGVQRGL+  I+ RFE           V PS E  Q+HY DL  RPF
Sbjct: 42  AAEMERTFIAIKPDGVQRGLISEILSRFERKGFKLVAIKLVVPSKEFAQKHYHDLKDRPF 101

Query: 308 FPGLVKYMXSGPVVPMVWEGLNVVKTGRXMLGATNPXDSQPGTIRGDLCIQVGRNIIHGS 487
           F GL  ++ SGPV+ MVWEG  V+K GR ++GAT+P  S+PGTIRGDL + VGRNIIHGS
Sbjct: 102 FNGLCDFLSSGPVLAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGS 161

Query: 488 DSVESAKKEIGLWFTDXEVVGWTPAXENWVY 580
           D  E+AK EIGLWF   E+V +T   E W+Y
Sbjct: 162 DGPETAKAEIGLWFEPRELVSYTSNEEKWIY 192


>10_08_0945 -
           21738643-21738760,21740056-21740287,21740582-21740630,
           21740720-21740776
          Length = 151

 Score =  181 bits (440), Expect = 8e-46
 Identities = 80/148 (54%), Positives = 104/148 (70%)
 Frame = +2

Query: 140 ERTFIMVKPDGVQRGLVGTIIERFEXXXXXXXXXXXVWPSXELLQQHYSDLASRPFFPGL 319
           E+TFIM+KPDGVQRGL+G +I RFE           +       ++HY+DL+S+PFF GL
Sbjct: 4   EQTFIMIKPDGVQRGLIGEVIGRFEKKGFYLKAMKLINVEKSFAEKHYADLSSKPFFGGL 63

Query: 320 VKYMXSGPVVPMVWEGLNVVKTGRXMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVE 499
           V+Y+ SGPVV MVWEG  VV TGR ++GATNP  ++PGTIRGD  + +GRN+IHGSDSVE
Sbjct: 64  VEYIVSGPVVAMVWEGKQVVSTGRKLVGATNPLAAEPGTIRGDFAVDIGRNVIHGSDSVE 123

Query: 500 SAKKEIGLWFTDXEVVGWTPAXENWVYE 583
           +A+KEI LWF +  +  W      W+YE
Sbjct: 124 NARKEIALWFPEG-IAEWRSNQHPWIYE 150


>07_03_0445 -
           18281715-18281832,18282274-18282505,18283486-18283534,
           18283733-18283783
          Length = 149

 Score =  178 bits (434), Expect = 4e-45
 Identities = 80/148 (54%), Positives = 103/148 (69%)
 Frame = +2

Query: 140 ERTFIMVKPDGVQRGLVGTIIERFEXXXXXXXXXXXVWPSXELLQQHYSDLASRPFFPGL 319
           E++FIM+KPDGVQRGL+G II RFE           +       QQHY+DL+ +PFFPGL
Sbjct: 2   EQSFIMIKPDGVQRGLIGDIISRFEKKGFYLRGMKFMNVERSFAQQHYADLSDKPFFPGL 61

Query: 320 VKYMXSGPVVPMVWEGLNVVKTGRXMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVE 499
           V+Y+ SGPVV MVWEG +VV TGR ++GAT P ++ PGTIR D  ++VGRN+IHGSDSV+
Sbjct: 62  VEYIISGPVVAMVWEGKDVVATGRRIIGATRPWEAAPGTIRADYAVEVGRNVIHGSDSVD 121

Query: 500 SAKKEIGLWFTDXEVVGWTPAXENWVYE 583
           + KKEI LWF +  +  W      W+YE
Sbjct: 122 NGKKEIALWFPEG-LAEWRSNLHPWIYE 148


>12_02_0695 +
           22220054-22220056,22221226-22221276,22221415-22221501,
           22222064-22222144,22222241-22222353,22222482-22222531,
           22222790-22222857
          Length = 150

 Score =  175 bits (425), Expect = 5e-44
 Identities = 76/148 (51%), Positives = 100/148 (67%)
 Frame = +2

Query: 140 ERTFIMVKPDGVQRGLVGTIIERFEXXXXXXXXXXXVWPSXELLQQHYSDLASRPFFPGL 319
           E+++IM+KPDGVQRGLVG II RFE                +L Q+HY DL  +PFFPGL
Sbjct: 3   EQSYIMIKPDGVQRGLVGEIISRFEKKGFVLKGLKLFQCPKDLAQEHYKDLKEKPFFPGL 62

Query: 320 VKYMXSGPVVPMVWEGLNVVKTGRXMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVE 499
           ++Y+ SGPVV M WEG  VV + R ++GATNP  ++PGTIRGDL +Q GRN++HGSDS +
Sbjct: 63  IEYITSGPVVCMAWEGNGVVASARKLIGATNPLQAEPGTIRGDLAVQTGRNVVHGSDSPD 122

Query: 500 SAKKEIGLWFTDXEVVGWTPAXENWVYE 583
           + K+EI LWF + E+  W      W+ E
Sbjct: 123 NGKREIALWFKEGELCEWESVLTPWLVE 150


>06_01_0900 + 6926600-6927202
          Length = 200

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = +3

Query: 819 APPPPSXPGXKXSXXFGXXXXPXXLXXXPP 908
           APPPP+    K S  FG    P      PP
Sbjct: 154 APPPPAAASAKSSMDFGGRDAPPLFHHPPP 183


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,677,304
Number of Sequences: 37544
Number of extensions: 324444
Number of successful extensions: 810
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)