Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_B23
         (913 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical p...   183   1e-46
AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical ...    66   2e-11
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ...    32   0.65 

>Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical
           protein F25H2.5 protein.
          Length = 153

 Score =  183 bits (446), Expect = 1e-46
 Identities = 87/149 (58%), Positives = 102/149 (68%), Gaps = 1/149 (0%)
 Frame = +2

Query: 140 ERTFIMVKPDGVQRGLVGTIIERFEXXXXXXXXXXXVWPSXELLQQHYSDLASRPFFPGL 319
           ERTFI +KPDGV RGLVG II RFE           +  S   L+ HY DL  +PFFP L
Sbjct: 5   ERTFIAIKPDGVHRGLVGKIIARFEERGYKLVALKQMTASKAHLEVHYQDLKDKPFFPSL 64

Query: 320 VKYMXSGPVVPMVWEGLNVVKTGRXMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVE 499
           ++YM SGPVV MVW+GL+VVK GR MLGATNP  S PGTIRGD CIQ GRNI HGSD+V+
Sbjct: 65  IEYMSSGPVVAMVWQGLDVVKQGRSMLGATNPLASAPGTIRGDFCIQTGRNICHGSDAVD 124

Query: 500 SAKKEIGLWFTDXEVVGW-TPAXENWVYE 583
           SA +EI  WF   E+  + +P   +WVYE
Sbjct: 125 SANREIAHWFKQEEINDYASPFINSWVYE 153


>AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical
           protein F55A3.6 protein.
          Length = 118

 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 36/79 (45%), Positives = 47/79 (59%)
 Frame = +2

Query: 299 RPFFPGLVKYMXSGPVVPMVWEGLNVVKTGRXMLGATNPXDSQPGTIRGDLCIQVGRNII 478
           +PFFP L+ YM SGPVV M+WEG +VVK  R +LG       +  +I  DL ++      
Sbjct: 33  KPFFPLLIDYMSSGPVVAMLWEGCDVVKRARVILGEELEV-GEFRSIFYDLVVRDTHKGC 91

Query: 479 HGSDSVESAKKEIGLWFTD 535
           H SDSV SA +E  LWF +
Sbjct: 92  HCSDSVASANREYVLWFEE 110


>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
           protein Y48G9A.4 protein.
          Length = 1115

 Score = 31.9 bits (69), Expect = 0.65
 Identities = 14/37 (37%), Positives = 15/37 (40%)
 Frame = +1

Query: 736 PXXPXPLPXXWXVXXXXXPXXXPLXGXXPPPHPPXXG 846
           P  P PLP          P   P+ G  PPP PP  G
Sbjct: 562 PPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGG 598


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,022,534
Number of Sequences: 27780
Number of extensions: 258816
Number of successful extensions: 674
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)