Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_B21
(899 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF101312-3|AAC69219.1| 83|Caenorhabditis elegans Ribosomal pro... 149 3e-36
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.091
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.091
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.091
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.28
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.28
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.37
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 0.85
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 31 1.1
U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor... 31 1.5
U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor... 31 1.5
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 2.0
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.4
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 3.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.4
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.5
AC024200-2|AAF35997.2| 189|Caenorhabditis elegans Hypothetical ... 29 4.5
AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like ... 24 5.9
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 29 6.0
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 29 6.0
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 6.0
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 6.0
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 26 7.3
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 28 7.9
>AF101312-3|AAC69219.1| 83|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 27 protein.
Length = 83
Score = 149 bits (361), Expect = 3e-36
Identities = 64/83 (77%), Positives = 72/83 (86%)
Frame = +3
Query: 78 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 257
MPLA+DLLHP P E R HKLKRLV HPNSYFMDVKC GC+KI+TVFSHA VVVC GC+
Sbjct: 1 MPLAVDLLHPEPQREIRCHKLKRLVQHPNSYFMDVKCSGCFKISTVFSHATTVVVCVGCN 60
Query: 258 TILCQPTGGRARLTEGCSFRRKQ 326
T+LCQPT G+A+LTEGCSFR+KQ
Sbjct: 61 TVLCQPTRGKAKLTEGCSFRKKQ 83
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 34.7 bits (76), Expect = 0.091
Identities = 24/77 (31%), Positives = 24/77 (31%)
Frame = +2
Query: 623 GXXPPPPXXXXKKTXXSXQKXXXPXXXXXPPPXPXXXXXPPPPPLXXXXFFFPXPXXGGG 802
G PPPP P PPP P PPPPP P P GG
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPP-PRT-GSPPPPPTGSP----PPPPAGGS 288
Query: 803 XGSFFXXKKXXPPPPXG 853
PPPP G
Sbjct: 289 PPPPRAGSPPPPPPPRG 305
Score = 32.7 bits (71), Expect = 0.37
Identities = 20/72 (27%), Positives = 21/72 (29%)
Frame = +2
Query: 632 PPPPXXXXKKTXXSXQKXXXPXXXXXPPPXPXXXXXPPPPPLXXXXFFFPXPXXGGGXGS 811
PPPP + P PPP PPPP P P GG
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 323
Query: 812 FFXXKKXXPPPP 847
PPPP
Sbjct: 324 --AGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 34.7 bits (76), Expect = 0.091
Identities = 24/77 (31%), Positives = 24/77 (31%)
Frame = +2
Query: 623 GXXPPPPXXXXKKTXXSXQKXXXPXXXXXPPPXPXXXXXPPPPPLXXXXFFFPXPXXGGG 802
G PPPP P PPP P PPPPP P P GG
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPP-PRT-GSPPPPPTGSP----PPPPAGGS 309
Query: 803 XGSFFXXKKXXPPPPXG 853
PPPP G
Sbjct: 310 PPPPRAGSPPPPPPPRG 326
Score = 32.7 bits (71), Expect = 0.37
Identities = 20/72 (27%), Positives = 21/72 (29%)
Frame = +2
Query: 632 PPPPXXXXKKTXXSXQKXXXPXXXXXPPPXPXXXXXPPPPPLXXXXFFFPXPXXGGGXGS 811
PPPP + P PPP PPPP P P GG
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 344
Query: 812 FFXXKKXXPPPP 847
PPPP
Sbjct: 345 --AGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 34.7 bits (76), Expect = 0.091
Identities = 24/77 (31%), Positives = 24/77 (31%)
Frame = +2
Query: 623 GXXPPPPXXXXKKTXXSXQKXXXPXXXXXPPPXPXXXXXPPPPPLXXXXFFFPXPXXGGG 802
G PPPP P PPP P PPPPP P P GG
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPP-PRT-GSPPPPPTGSP----PPPPAGGS 294
Query: 803 XGSFFXXKKXXPPPPXG 853
PPPP G
Sbjct: 295 PPPPRAGSPPPPPPPRG 311
Score = 32.7 bits (71), Expect = 0.37
Identities = 20/72 (27%), Positives = 21/72 (29%)
Frame = +2
Query: 632 PPPPXXXXKKTXXSXQKXXXPXXXXXPPPXPXXXXXPPPPPLXXXXFFFPXPXXGGGXGS 811
PPPP + P PPP PPPP P P GG
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 329
Query: 812 FFXXKKXXPPPP 847
PPPP
Sbjct: 330 --AGTGSPPPPP 339
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +2
Query: 623 GXXPPPPXXXXKKTXXSXQKXXXPXXXXXPPPXPXXXXXPPPPP 754
G PP P T P PPP P PPPPP
Sbjct: 258 GQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPP 301
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +2
Query: 623 GXXPPPPXXXXKKTXXSXQKXXXPXXXXXPPPXPXXXXXPPPPP 754
G PP P T P PPP P PPPPP
Sbjct: 268 GQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPP 311
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.7 bits (71), Expect = 0.37
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +2
Query: 713 PPXPXXXXXPPPPPLXXXXFFFPXPXXGGGXGSFFXXKKXXPPPPXGXXG 862
PP P PPPPP+ P P GG PPPP G
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLG 124
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +2
Query: 623 GXXPPPPXXXXKKTXXSXQKXXXPXXXXXPPPXPXXXXXPPPPP 754
G PPPP P PPP P PPPPP
Sbjct: 81 GGIPPPPPMFA-----GGIPPPPPMMGGIPPPPPMFGAPPPPPP 119
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 710 PPPXPXXXXXPPPPPLXXXXFFFPXPXXGGGXG 808
PPP P PPPPP+ P P G G
Sbjct: 95 PPPPPMMGGIPPPPPMFGAP---PPPPPPSGLG 124
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.5 bits (68), Expect = 0.85
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +2
Query: 635 PPPXXXXKKTXXSXQKXXXPXXXXXPPPXPXXXXXPPPPP 754
PPP Q P PPP P PPPPP
Sbjct: 40 PPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +2
Query: 632 PPPPXXXXKKTXXSXQKXXXPXXXXXPPPXPXXXXXPPPPPL 757
PPPP P PPP PPPPP+
Sbjct: 32 PPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPM 73
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +2
Query: 692 PXXXXXPPPXPXXXXXPPPPPL 757
P PPP P PPPPP+
Sbjct: 60 PMCPPPPPPPPPPMCPPPPPPM 81
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/77 (29%), Positives = 27/77 (35%)
Frame = +2
Query: 623 GXXPPPPXXXXKKTXXSXQKXXXPXXXXXPPPXPXXXXXPPPPPLXXXXFFFPXPXXGGG 802
G PPP + S ++ PPP P PPPPP P G G
Sbjct: 70 GTGTPPPPPTGEPQDLSAEEGNASRR---PPPPPKGTGTPPPPPTGE-----PQDLSGEG 121
Query: 803 XGSFFXXKKXXPPPPXG 853
S + PPPP G
Sbjct: 122 NAS-----RRPPPPPKG 133
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = +2
Query: 710 PPPXPXXXXXPPPPPLXXXXFFFPXPXXGGGXGSFFXXKKXXPPPPXG 853
PPP P PPPPP P G G S + PPPP G
Sbjct: 33 PPPPPKGTGTPPPPPTGE-----PQDLSGEGNAS-----RRPPPPPKG 70
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = +2
Query: 710 PPPXPXXXXXPPPPPLXXXXFFFPXPXXGGGXGSFFXXKKXXPPPPXG 853
PPP P PPPPP P G G S + PPPP G
Sbjct: 127 PPPPPKGTGSPPPPPTGE-----PQDLSGEGNAS-----RRPPPPPKG 164
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = +2
Query: 710 PPPXPXXXXXPPPPPLXXXXFFFPXPXXGGGXGSFFXXKKXXPPPPXG 853
PPP P PPPPP P G G S + PPPP G
Sbjct: 251 PPPPPKGTGSPPPPPTGE-----PQDLSGEGNAS-----RRPPPPPKG 288
>U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor
protein protein1, isoform c protein.
Length = 605
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 108 SPASERRKHKLKRLVPHPNSYFM-DVKCPGCYKITTVFSHAQRVVVCAGCSTILC 269
+P ERR + + + + Y++ D +CP C T F+ R C C +LC
Sbjct: 517 TPRRERRLTESELQLGKTSPYWIPDSECPNCMLCNTRFTIITRRHHCRACGRVLC 571
>U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor
protein protein1, isoform b protein.
Length = 1284
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 108 SPASERRKHKLKRLVPHPNSYFM-DVKCPGCYKITTVFSHAQRVVVCAGCSTILC 269
+P ERR + + + + Y++ D +CP C T F+ R C C +LC
Sbjct: 517 TPRRERRLTESELQLGKTSPYWIPDSECPNCMLCNTRFTIITRRHHCRACGRVLC 571
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -3
Query: 846 GGGGXFFFXXKKXPXPPPXXGXGKKKXXKXXGGGGGXXXXXGWGGGXXXXXG 691
GGGG P PP G GGGGG G GGG G
Sbjct: 43 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGG 94
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = -3
Query: 843 GGGXFFFXXKKXPXPPPXXGXGKKKXXKXXGGGGGXXXXXGWGGGXXXXXG 691
GGG P PPP G G GGG G G GGG G
Sbjct: 100 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCG 150
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 4/52 (7%)
Frame = +2
Query: 710 PPPXPXXXXXPPPPP----LXXXXFFFPXPXXGGGXGSFFXXKKXXPPPPXG 853
PP P PPPPP L P P GG PPPP G
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = +2
Query: 692 PXXXXXPPPXPXXXXXPPPPPLXXXXFFFPXPXXGGGXGSFFXXKKXXPPPPXG 853
P PPP P PPPP P P GG G PPPP G
Sbjct: 753 PISGGPPPPPPPPGGCPPPP---------PPPPPGGFKGG------PPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 4/52 (7%)
Frame = +2
Query: 710 PPPXPXXXXXPPPPP----LXXXXFFFPXPXXGGGXGSFFXXKKXXPPPPXG 853
PP P PPPPP L P P GG PPPP G
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = +2
Query: 692 PXXXXXPPPXPXXXXXPPPPPLXXXXFFFPXPXXGGGXGSFFXXKKXXPPPPXG 853
P PPP P PPPP P P GG G PPPP G
Sbjct: 753 PISGGPPPPPPPPGGCPPPP---------PPPPPGGFKGG------PPPPPPPG 791
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +2
Query: 632 PPPPXXXXKKTXXSXQKXXXPXXXXXPPPXPXXXXXPPPPPL 757
PPPP Q P PPP P PPPPP+
Sbjct: 67 PPPPPPPPPLISILQQAPPPP-----PPPPPPTLKAPPPPPI 103
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 4/52 (7%)
Frame = +2
Query: 710 PPPXPXXXXXPPPPP----LXXXXFFFPXPXXGGGXGSFFXXKKXXPPPPXG 853
PP P PPPPP L P P GG PPPP G
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = +2
Query: 692 PXXXXXPPPXPXXXXXPPPPPLXXXXFFFPXPXXGGGXGSFFXXKKXXPPPPXG 853
P PPP P PPPP P P GG G PPPP G
Sbjct: 336 PISGGPPPPPPPPGGCPPPP---------PPPPPGGFKGG------PPPPPPPG 374
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -3
Query: 846 GGGGXFFFXXKKXPXPPPXXGXGKKKXXKXXGGGGGXXXXXGWGGGXXXXXG 691
GGGG P P P G GGGGG G GGG G
Sbjct: 61 GGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGG 112
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -3
Query: 846 GGGGXFFFXXKKXPXPPPXXGXGKKKXXKXXGGGGGXXXXXGWGGGXXXXXG 691
GGGG P P P G GGGGG G GGG G
Sbjct: 61 GGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGG 112
>AC024200-2|AAF35997.2| 189|Caenorhabditis elegans Hypothetical
protein Y71F9AL.10 protein.
Length = 189
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 99 LHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVC 245
LH +P H +R VP + MD+KCP C+K+ +V+C
Sbjct: 81 LHATPGRLHGHHS-RRSVP---VFMMDMKCPVCHKVVPSDDADIHLVMC 125
>AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like
(grd related) protein20 protein.
Length = 163
Score = 23.8 bits (49), Expect(2) = 5.9
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -3
Query: 642 GGGGXXPXXXXXXXXXGAHPPPXKXXPPPPP 550
GGGG P P K PPPPP
Sbjct: 40 GGGGCLPTLGCSVISFNV--PTLKLPPPPPP 68
Score = 23.4 bits (48), Expect(2) = 5.9
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 753 GGGGGXXXXXGWGGGXXXXXG 691
GGGGG G GGG G
Sbjct: 21 GGGGGGGCGGGCGGGCGGGGG 41
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +2
Query: 632 PPPPXXXXKKTXXSXQKXXXPXXXXXPPPXPXXXXXPPPPP 754
PPPP S P PPP P PPPPP
Sbjct: 90 PPPPPPASPCCGPSP----VPAPCCPPPPAPAAPCCPPPPP 126
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
Frame = +2
Query: 710 PPPXPXXXXXPPPPPLXXXXFFFP---XPXXGGGXG 808
PPP P P PPL F P P GGG G
Sbjct: 33 PPPPPCGCGAPALPPLQLPRFELPRLSLPSLGGGCG 68
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
Frame = +2
Query: 710 PPPXPXXXXXPPPPPLXXXXFFFP---XPXXGGGXG 808
PPP P P PPL F P P GGG G
Sbjct: 33 PPPPPCGCGAPALPPLQLPRFELPRLSLPSLGGGCG 68
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +2
Query: 692 PXXXXXPPPXPXXXXXPPPPPL 757
P PPP P PPPPP+
Sbjct: 67 PPPICPPPPPPPMPCPPPPPPM 88
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Frame = +2
Query: 632 PPPPXXXXKKTXXSXQKXXXPXXXXXPPPX--PXXXXXPPPPPLXXXXFFFPXPXXGGG 802
PPPP K P PPP P PPPPPL P P G
Sbjct: 1358 PPPPPPTMSKAPTGV-----PLPVPPPPPLFSPSMILPPPPPPLPSEEKKNPLPTANNG 1411
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 26.2 bits (55), Expect(2) = 7.3
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 551 GGGGGXXFXGGGWAXXXXXXXXXXGXXPPPP 643
GGGGG GGG PPPP
Sbjct: 13 GGGGGGGGGGGGGEAGYSGGAGVEAPPPPPP 43
Score = 20.6 bits (41), Expect(2) = 7.3
Identities = 7/15 (46%), Positives = 7/15 (46%)
Frame = +2
Query: 710 PPPXPXXXXXPPPPP 754
PPP P P P P
Sbjct: 38 PPPPPPADAAPAPAP 52
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 753 GGGGGXXXXXGWGGG 709
GGGGG GWGGG
Sbjct: 222 GGGGGYGSGGGWGGG 236
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,448,161
Number of Sequences: 27780
Number of extensions: 416549
Number of successful extensions: 2289
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1837
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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