Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_B18
         (913 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    29   5.1  
05_07_0042 - 27265687-27267159                                         29   5.1  
05_03_0626 - 16335816-16335917,16336331-16336558,16336694-163369...    28   9.0  
02_04_0414 - 22685981-22686178,22686374-22686465,22686580-226866...    28   9.0  

>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 27/106 (25%), Positives = 28/106 (26%)
 Frame = +3

Query: 567 GAPXXKKXXXGXGPPPXLKXXXKXXFFXGKXGXPXAFFXXPXXXPXKKXXXXPPXXFXFF 746
           G P         GPPP  +            G P  F   P   P       PP    F 
Sbjct: 17  GFPPQPPPMNPYGPPPPQQPAY--GHMPPPQGAPPPFLAPPPPPPP---GPPPPHQPQFN 71

Query: 747 FXPXXXXXXXXXFFXXXKKXPPPPPGXXGVXXFXXPXPXXPXXKNP 884
           F P                 PPPPP   GV     P P  P    P
Sbjct: 72  FGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPP 117


>05_07_0042 - 27265687-27267159
          Length = 490

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -1

Query: 244 LLKILGIPFEIAPAYARCSWADIL 173
           ++ ++ +PF + P YA+C W D L
Sbjct: 178 VMAMVELPFMVRPEYAQCLWGDTL 201


>05_03_0626 -
           16335816-16335917,16336331-16336558,16336694-16336973,
           16337596-16338560
          Length = 524

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -2

Query: 834 PPXXXGGGGGXFLXXKKXFPNPPP 763
           P    GGGGG        FP+PPP
Sbjct: 74  PDDGGGGGGGLAFLPPTIFPSPPP 97


>02_04_0414 -
           22685981-22686178,22686374-22686465,22686580-22686676,
           22686801-22686916,22687314-22687513,22687588-22687740,
           22687960-22688171,22688403-22688519,22688613-22688687,
           22688815-22688853,22689518-22689689,22689809-22690056,
           22690151-22690324,22690418-22690504
          Length = 659

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +1

Query: 232 ISSEDFVRAFLK*SRPSSLDT*YMKELKGSITDYHGRTLLILKMINK 372
           I  E F+R +L      S  T   K+LKGS++     T  +L +IN+
Sbjct: 80  IEFESFLREYLNLQAKGSSKTGGKKKLKGSVSFLKASTTTLLHVINE 126


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,280,401
Number of Sequences: 37544
Number of extensions: 397796
Number of successful extensions: 1122
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1027
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)