Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_B17
(883 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0578 + 4295386-4296489,4297394-4297507 174 9e-44
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 174 9e-44
10_02_0199 + 6668902-6669293,6669825-6669882 34 0.17
03_05_0366 - 23505755-23506441 33 0.30
08_02_1278 - 25838146-25839411 32 0.70
04_01_0208 + 2596110-2596928 31 1.2
09_04_0273 + 16292553-16293002 30 2.8
08_01_0965 + 9739150-9739557 30 2.8
07_03_1596 - 28012392-28012799 30 2.8
03_01_0520 - 3900387-3900613,3900812-3900853,3902092-3902210,390... 30 2.8
03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657 30 2.8
11_06_0704 - 26450916-26451128,26451439-26451831 29 3.7
12_02_0030 + 12469707-12469902,12470337-12470658,12472208-124722... 29 4.9
01_01_0808 + 6287428-6287683,6287801-6288016,6288165-6288310,629... 29 4.9
12_02_0634 + 21416205-21416954 29 6.5
11_01_0388 + 2933006-2934173,2934312-2934371,2934877-2935067 29 6.5
06_03_0270 + 19009412-19009888,19009936-19011048,19011810-190118... 29 6.5
06_02_0233 + 13315579-13316046 29 6.5
04_01_0588 + 7657510-7657992,7658397-7658843 29 6.5
02_04_0457 + 23093020-23093343,23093798-23093806 29 6.5
10_08_0894 - 21365629-21365766,21365849-21365950,21366042-213662... 28 8.6
01_03_0131 - 12858377-12858664,12859585-12859975,12863357-128633... 28 8.6
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 174 bits (423), Expect = 9e-44
Identities = 77/109 (70%), Positives = 88/109 (80%)
Frame = +2
Query: 224 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 403
VF+AP+RPD+V VH +S N RQPY VS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR
Sbjct: 31 VFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHR 90
Query: 404 SGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAALGGSRCCYRRPS 550
+GQGAFGNMCRGGRMFAPTK WR+WHRRVN+ RR A+ + PS
Sbjct: 91 AGQGAFGNMCRGGRMFAPTKTWRKWHRRVNVHLRRVAVASALAATSVPS 139
Score = 95.5 bits (227), Expect = 5e-20
Identities = 46/95 (48%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Frame = +3
Query: 561 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 740
ARGH IE +PELPLV++D + I KT QA+ L+++ A++D K S +R GKGKMRN
Sbjct: 143 ARGHRIETVPELPLVISDSAESIEKTSQAIKILKQVGAYADAEKAKDSVGIRPGKGKMRN 202
Query: 741 RRRIQRKGPLIIFNKD-QGLTRALPQHPGVELLNV 842
RR I RKGPLI++ + + +A PGV++ NV
Sbjct: 203 RRYINRKGPLIVYGTEGSKIVKAFRNLPGVDVANV 237
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 174 bits (423), Expect = 9e-44
Identities = 83/121 (68%), Positives = 92/121 (76%)
Frame = +2
Query: 188 DGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVA 367
D AG Q P V +APIRPD+V H +S N RQPY VS+ AGHQTSAESWGTGRAV+
Sbjct: 21 DSAGIQ-MPQ--VLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAGHQTSAESWGTGRAVS 77
Query: 368 RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAALGGSRCCYRRP 547
RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHRRVN+R RR A+ + P
Sbjct: 78 RIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRRVNIRLRRIAVASALAATAVP 137
Query: 548 S 550
S
Sbjct: 138 S 138
Score = 95.5 bits (227), Expect = 5e-20
Identities = 46/95 (48%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Frame = +3
Query: 561 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 740
ARGH IE +PE PLVV+D ++ I KT Q++ L+++ A++D K S +RAGKGKMRN
Sbjct: 142 ARGHRIEGVPEFPLVVSDSIESIEKTAQSIKVLKQIGAYADAEKTKDSVAIRAGKGKMRN 201
Query: 741 RRRIQRKGPLIIFNKD-QGLTRALPQHPGVELLNV 842
RR I RKGPLI++ + + +A PGV++ NV
Sbjct: 202 RRYINRKGPLIVYGTEGSKVVKAFRNLPGVDVANV 236
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 33.9 bits (74), Expect = 0.17
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +2
Query: 335 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 445
A+SW TGRA A + R R GG R A N G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>03_05_0366 - 23505755-23506441
Length = 228
Score = 33.1 bits (72), Expect = 0.30
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Frame = +2
Query: 167 GVLREE*DGAGXQPSP---SRFVFKAPIRPDLVNDVHVSMSKNSR-QPYCVSKEAGHQTS 334
G R+ G+G + P ++ AP D +V S + R P C S E + +
Sbjct: 87 GHRRQRQGGSGWERHPWPHDSWIHAAPTAADDEKEVARSNAHARRPDPRCPSDEEDEEEA 146
Query: 335 AESWGTGRAVARIPRVRGGGTHRSGQGA 418
AES TG A R R+ G T+ + + A
Sbjct: 147 AESGATGLAHTRAGRIHAGPTNDNDEEA 174
>08_02_1278 - 25838146-25839411
Length = 421
Score = 31.9 bits (69), Expect = 0.70
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -3
Query: 665 APQEDDSLFGLVDLLDFVGYNQGKLGNLFNNVSSSL 558
A +E LF L+D+LD V +G+L LF+ S++L
Sbjct: 89 AAREPQRLFRLLDMLDAVARERGRLDELFSGESATL 124
>04_01_0208 + 2596110-2596928
Length = 272
Score = 31.1 bits (67), Expect = 1.2
Identities = 26/82 (31%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Frame = +2
Query: 320 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF-GNMCRGGRMFAPTKP-WRRWHRRVN 493
G + E GR GGG + A G R +P WRRW RR
Sbjct: 123 GCEAEGEDGAAGRRSGEEGEAAGGGRRGGKRRAMAGTRLRRSPCETEGRPGWRRWRRRWR 182
Query: 494 LRQR-RAALG-GSRCCYRRPSA 553
R+R R G G +RRP+A
Sbjct: 183 RRRRDRPVHGRGGTGGWRRPAA 204
>09_04_0273 + 16292553-16293002
Length = 149
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 466 LAALAPSRQPPTAESGLGRQPLLLPAS 546
LA P+ PP A S R PLLLP+S
Sbjct: 54 LAGAKPASIPPPASSDAARAPLLLPSS 80
>08_01_0965 + 9739150-9739557
Length = 135
Score = 29.9 bits (64), Expect = 2.8
Identities = 25/83 (30%), Positives = 38/83 (45%)
Frame = +2
Query: 281 KNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 460
+ ++P V+ ++G +A + G A R+P + G R G A G RG A
Sbjct: 11 RGDQRPREVAADSGGAPAATAAPGGEARLRLPALALLGLRRQGAAAAG---RGS---AAG 64
Query: 461 KPWRRWHRRVNLRQRRAALGGSR 529
RRW R L++ A GG+R
Sbjct: 65 GQERRWRPRAVLQRGTAGDGGAR 87
>07_03_1596 - 28012392-28012799
Length = 135
Score = 29.9 bits (64), Expect = 2.8
Identities = 25/83 (30%), Positives = 38/83 (45%)
Frame = +2
Query: 281 KNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 460
+ ++P V+ ++G +A + G A R+P + G R G A G RG A
Sbjct: 11 RGDQRPREVAADSGGAPAATAAPGGEARLRLPALALLGLRRQGAAAAG---RGS---AAG 64
Query: 461 KPWRRWHRRVNLRQRRAALGGSR 529
RRW R L++ A GG+R
Sbjct: 65 GQERRWRPRAVLQRGTAGDGGAR 87
>03_01_0520 -
3900387-3900613,3900812-3900853,3902092-3902210,
3903633-3903712,3903829-3903856,3904151-3904272,
3904714-3904857,3904897-3906327
Length = 730
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 440 HHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 333
HH + H + YE+ + H + RQ QY QH
Sbjct: 150 HHQQYQQHHHQQQYEHQNRIHFQHHRQQQQYQQHQH 185
>03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657
Length = 390
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = -3
Query: 413 PDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 312
P + +HHHGH + Q H G PP
Sbjct: 33 PQEHHHHHHHGHHGHHHEQQQQQQHHHHLGPPPP 66
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = -3
Query: 410 DRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 312
D +HHH H G H Q QH PP
Sbjct: 32 DPQEHHHHHHHGHHGHHHEQQQQQQHHHHLGPP 64
>11_06_0704 - 26450916-26451128,26451439-26451831
Length = 201
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +2
Query: 413 GAFGNMCRGGRMFAPTK-PWRRWHRRVNLRQRRAALGGSRCCYR 541
GA G GG A + WRRW R + AAL GS C R
Sbjct: 74 GAAGACGDGGSGIAGSGCSWRRWQRGASTTSTLAALAGSGRCSR 117
>12_02_0030 +
12469707-12469902,12470337-12470658,12472208-12472245,
12472486-12473573
Length = 547
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = +2
Query: 347 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAA 514
G G A + RV GGG+ G+GA + G + W R +RR A
Sbjct: 84 GAGGRGAGVRRVEGGGSGAVGEGARAAVLGGAATIGARRLWAGGAARGGFGRRRGA 139
>01_01_0808 +
6287428-6287683,6287801-6288016,6288165-6288310,
6290305-6290584,6290969-6291165
Length = 364
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/59 (23%), Positives = 28/59 (47%)
Frame = -3
Query: 827 HTGMLRKGASQTLILVEDYEGSLTLDTTTVAHFTLTSTKTLRLVHLKDIRPCLEAPQED 651
H G R+GA+ + + S D V F L ++ +++L ++P L +P ++
Sbjct: 100 HNGSFRQGANFAVAGATSLDASFFSDIPGVGKFVLNTSSSVQLGWFDSLKPLLCSPAQE 158
>12_02_0634 + 21416205-21416954
Length = 249
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/67 (32%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
Frame = +2
Query: 308 SKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKP-WRRWHR 484
S +AG A TG A GG + G RG KP WRRW R
Sbjct: 157 SCDAGRGGGAAGGCTGEAGGA---AGGGRLGEKRRATAGRQLRGSPRETEGKPGWRRWRR 213
Query: 485 RVNLRQR 505
R R+R
Sbjct: 214 RWRRRRR 220
>11_01_0388 + 2933006-2934173,2934312-2934371,2934877-2935067
Length = 472
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/46 (34%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Frame = -3
Query: 779 EDYEGSLTL--DTTTVAHFTLTSTKTLRLVHLKDIRPCLEAPQEDD 648
ED +GS+ + DTT++ + +L++ ++L LV +K ++P L E+D
Sbjct: 236 EDCKGSVIVSCDTTSMYYKSLSTLQSLLLVCVKKLQPKLVVTIEED 281
>06_03_0270 +
19009412-19009888,19009936-19011048,19011810-19011899,
19011928-19012027,19012135-19012333,19012559-19012679
Length = 699
Score = 28.7 bits (61), Expect = 6.5
Identities = 29/116 (25%), Positives = 43/116 (37%)
Frame = +2
Query: 125 SSEMSLSVARPLXVGVLREE*DGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYC 304
+ +M+ S A +G L + D P +R K P + + + +++ R P
Sbjct: 12 AGDMAPSSASDPTLGFLTKR-DTEVKLPRATRVKNKTPASVQITAEQILREARSGRSPRS 70
Query: 305 VSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWR 472
V T + S T A AR R G A G+ GGR T P R
Sbjct: 71 VPPSRRSPTPSSSPSTASAAARSSRTPSAAP--GGTSARGSSTPGGRSGRGTSPAR 124
>06_02_0233 + 13315579-13316046
Length = 155
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +2
Query: 377 RVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRR 508
R RG H +G FG GGR+ A + RW RR R+RR
Sbjct: 60 RGRGRRPHPAGTAVFGGGV-GGRLSAERR--SRWQRRPARRERR 100
>04_01_0588 + 7657510-7657992,7658397-7658843
Length = 309
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
Frame = +2
Query: 257 NDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRV---RGGGTHRSGQGAFGN 427
+D+ ++ SR + + ++S+ W G R+ + GGG R G
Sbjct: 201 HDIQWGDNQPSRSSGVLPSSSEWRSSSSRWDLGEITRRMDTLDMQMGGGQQRRPPAEDGL 260
Query: 428 MCRGGRMFAPTKPWRRW 478
P PWRRW
Sbjct: 261 GWASSWFGRPNLPWRRW 277
>02_04_0457 + 23093020-23093343,23093798-23093806
Length = 110
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +2
Query: 320 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFG 424
G + S W G A A VRGGG RSG G G
Sbjct: 76 GRRRSQPRWRGGAAAAEAD-VRGGGARRSGGGDEG 109
>10_08_0894 -
21365629-21365766,21365849-21365950,21366042-21366284,
21366685-21366813,21366999-21367103,21367196-21367387,
21367486-21367639,21368148-21368209,21368291-21368437,
21368517-21368564,21369091-21369228,21369305-21369451,
21370579-21370665,21370754-21370861,21370941-21371041,
21371870-21371996,21372820-21372936,21373029-21373106,
21373240-21373284,21373637-21373756,21373838-21373964,
21374033-21374253,21374347-21374529,21374772-21374924,
21375051-21375146,21375226-21375331,21375410-21375492,
21375576-21375728,21375819-21376058,21376367-21376414,
21376782-21376928,21377007-21377115,21377200-21377345,
21377715-21377809,21377944-21378049,21378177-21378368,
21378456-21378686,21378772-21378866,21379426-21379529,
21380040-21380284,21380300-21380347,21380376-21380480,
21380630-21380767,21381458-21381649,21381738-21381914,
21382001-21382129,21382203-21382316,21382407-21382746,
21382836-21383064,21383155-21383455,21384311-21384358,
21387963-21388355
Length = 2493
Score = 28.3 bits (60), Expect = 8.6
Identities = 27/95 (28%), Positives = 37/95 (38%), Gaps = 3/95 (3%)
Frame = +2
Query: 230 KAPIRPDLVNDVHVSMSKNSRQPYCVSKEA---GHQTSAESWGTGRAVARIPRVRGGGTH 400
+A R D +D +V+ + R+ + A G + S G R+ GGG
Sbjct: 40 EAAARADGDDDGYVARRRRGREGKAEATTAARGGGRRSGRGRGWDERWRRLGFFGGGGRG 99
Query: 401 RSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQR 505
R G+G G RG R WRR R R R
Sbjct: 100 RGGRGGRG---RGARGAGGGGAWRRRRERGRERMR 131
>01_03_0131 -
12858377-12858664,12859585-12859975,12863357-12863397,
12864745-12865419
Length = 464
Score = 28.3 bits (60), Expect = 8.6
Identities = 24/64 (37%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 344 WGTGRAVARIPRVR-GGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAALG 520
WG R R R GGG G+GA + GG A P HRR+ L AA G
Sbjct: 147 WGLRWLARRSSRGRSGGGVRGGGRGAAADPAMGGA--ATAFPLALAHRRLFLLLLLAA-G 203
Query: 521 GSRC 532
S C
Sbjct: 204 SSSC 207
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,544,662
Number of Sequences: 37544
Number of extensions: 570049
Number of successful extensions: 1884
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1875
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -