Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_B17
(883 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 186 5e-47
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 186 5e-47
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 186 5e-47
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 186 5e-47
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 136 5e-32
D21203-1|BAA04745.2| 1408|Drosophila melanogaster large Forked p... 31 2.1
D17528-1|BAA04479.1| 604|Drosophila melanogaster small forked p... 31 2.1
BT010233-1|AAQ23551.1| 947|Drosophila melanogaster RE59472p pro... 31 2.1
BT003626-1|AAO39629.1| 947|Drosophila melanogaster GH01416p pro... 31 2.1
AY166752-1|AAN85714.1| 1400|Drosophila melanogaster loechrig iso... 31 2.1
AY070541-1|AAL48012.1| 1400|Drosophila melanogaster LD22662p pro... 31 2.1
AE014297-2948|AAF55864.2| 1400|Drosophila melanogaster CG17299-P... 31 2.1
AE014297-2944|AAF55860.2| 947|Drosophila melanogaster CG17299-P... 31 2.1
AE014297-2943|AAN13851.1| 947|Drosophila melanogaster CG17299-P... 31 2.1
AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 31 2.8
AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-P... 31 2.8
AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 31 2.8
AE014298-2541|AAS65393.1| 95|Drosophila melanogaster CG5172-PB... 30 3.7
AE014298-2542|AAF48711.1| 133|Drosophila melanogaster CG5172-PA... 30 4.9
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 186 bits (452), Expect = 5e-47
Identities = 91/128 (71%), Positives = 103/128 (80%)
Frame = +2
Query: 134 MSLSVARPLXVGVLREE*DGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 313
MSL ARPL V V E+ + A + VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPL-VSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59
Query: 314 EAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 493
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWHR+VN
Sbjct: 60 LAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVN 119
Query: 494 LRQRRAAL 517
+ QRR AL
Sbjct: 120 VNQRRYAL 127
Score = 137 bits (331), Expect = 2e-32
Identities = 59/95 (62%), Positives = 80/95 (84%)
Frame = +3
Query: 558 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 737
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR
Sbjct: 141 QSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMR 200
Query: 738 NRRRIQRKGPLIIFNKDQGLTRALPQHPGVELLNV 842
+RRRI R+GPL++++KD+GL +A PG+E +NV
Sbjct: 201 DRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINV 235
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 186 bits (452), Expect = 5e-47
Identities = 91/128 (71%), Positives = 103/128 (80%)
Frame = +2
Query: 134 MSLSVARPLXVGVLREE*DGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 313
MSL ARPL V V E+ + A + VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPL-VSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59
Query: 314 EAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 493
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWHR+VN
Sbjct: 60 LAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVN 119
Query: 494 LRQRRAAL 517
+ QRR AL
Sbjct: 120 VNQRRYAL 127
Score = 127 bits (306), Expect = 2e-29
Identities = 55/88 (62%), Positives = 74/88 (84%)
Frame = +3
Query: 558 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 737
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR
Sbjct: 141 QSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMR 200
Query: 738 NRRRIQRKGPLIIFNKDQGLTRALPQHP 821
+RRRI R+GPL++++KD+GL +A P
Sbjct: 201 DRRRIARRGPLVVYDKDEGLRKAFRNIP 228
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 186 bits (452), Expect = 5e-47
Identities = 91/128 (71%), Positives = 103/128 (80%)
Frame = +2
Query: 134 MSLSVARPLXVGVLREE*DGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 313
MSL ARPL V V E+ + A + VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPL-VSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59
Query: 314 EAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 493
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWHR+VN
Sbjct: 60 LAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVN 119
Query: 494 LRQRRAAL 517
+ QRR AL
Sbjct: 120 VNQRRYAL 127
Score = 137 bits (331), Expect = 2e-32
Identities = 59/95 (62%), Positives = 80/95 (84%)
Frame = +3
Query: 558 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 737
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR
Sbjct: 141 QSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMR 200
Query: 738 NRRRIQRKGPLIIFNKDQGLTRALPQHPGVELLNV 842
+RRRI R+GPL++++KD+GL +A PG+E +NV
Sbjct: 201 DRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINV 235
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 186 bits (452), Expect = 5e-47
Identities = 91/128 (71%), Positives = 103/128 (80%)
Frame = +2
Query: 134 MSLSVARPLXVGVLREE*DGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 313
MSL ARPL V V E+ + A + VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPL-VSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59
Query: 314 EAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 493
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWHR+VN
Sbjct: 60 LAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVN 119
Query: 494 LRQRRAAL 517
+ QRR AL
Sbjct: 120 VNQRRYAL 127
Score = 137 bits (331), Expect = 2e-32
Identities = 59/95 (62%), Positives = 80/95 (84%)
Frame = +3
Query: 558 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 737
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR
Sbjct: 141 QSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMR 200
Query: 738 NRRRIQRKGPLIIFNKDQGLTRALPQHPGVELLNV 842
+RRRI R+GPL++++KD+GL +A PG+E +NV
Sbjct: 201 DRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINV 235
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 136 bits (328), Expect = 5e-32
Identities = 60/65 (92%), Positives = 62/65 (95%)
Frame = +2
Query: 323 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQ 502
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWHRRVN+ Q
Sbjct: 1 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRRVNVNQ 60
Query: 503 RRAAL 517
RR AL
Sbjct: 61 RRYAL 65
Score = 68.9 bits (161), Expect = 9e-12
Identities = 29/45 (64%), Positives = 39/45 (86%)
Frame = +3
Query: 558 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 692
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI K
Sbjct: 79 QSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQK 123
>D21203-1|BAA04745.2| 1408|Drosophila melanogaster large Forked
protein protein.
Length = 1408
Score = 31.1 bits (67), Expect = 2.1
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = -3
Query: 443 VHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 312
+ TC R P + H H H H +P H G+QPP
Sbjct: 1010 IRRTTCRYRSPSSRHP-HQHQHHPHPHPHPHHPHQLHGMGEQPP 1052
>D17528-1|BAA04479.1| 604|Drosophila melanogaster small forked
protein protein.
Length = 604
Score = 31.1 bits (67), Expect = 2.1
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = -3
Query: 443 VHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 312
+ TC R P + H H H H +P H G+QPP
Sbjct: 209 IRRTTCRYRSPSSRHP-HQHQHHPHPHPHPHHPHQLHGMGEQPP 251
>BT010233-1|AAQ23551.1| 947|Drosophila melanogaster RE59472p
protein.
Length = 947
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = +2
Query: 242 RPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 421
RP +D K+ P A T + S GTG A + GG +GQGA
Sbjct: 235 RPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAAAAAGQGAA 294
Query: 422 GNMCRGGRM 448
G GG M
Sbjct: 295 GG--AGGLM 301
>BT003626-1|AAO39629.1| 947|Drosophila melanogaster GH01416p
protein.
Length = 947
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = +2
Query: 242 RPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 421
RP +D K+ P A T + S GTG A + GG +GQGA
Sbjct: 235 RPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAAAAAGQGAA 294
Query: 422 GNMCRGGRM 448
G GG M
Sbjct: 295 GG--AGGLM 301
>AY166752-1|AAN85714.1| 1400|Drosophila melanogaster loechrig
isoform I protein.
Length = 1400
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = +2
Query: 242 RPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 421
RP +D K+ P A T + S GTG A + GG +GQGA
Sbjct: 688 RPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAAAAAGQGAA 747
Query: 422 GNMCRGGRM 448
G GG M
Sbjct: 748 GG--AGGLM 754
>AY070541-1|AAL48012.1| 1400|Drosophila melanogaster LD22662p
protein.
Length = 1400
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = +2
Query: 242 RPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 421
RP +D K+ P A T + S GTG A + GG +GQGA
Sbjct: 688 RPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAAAAAGQGAA 747
Query: 422 GNMCRGGRM 448
G GG M
Sbjct: 748 GG--AGGLM 754
>AE014297-2948|AAF55864.2| 1400|Drosophila melanogaster CG17299-PF,
isoform F protein.
Length = 1400
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = +2
Query: 242 RPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 421
RP +D K+ P A T + S GTG A + GG +GQGA
Sbjct: 688 RPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAAAAAGQGAA 747
Query: 422 GNMCRGGRM 448
G GG M
Sbjct: 748 GG--AGGLM 754
>AE014297-2944|AAF55860.2| 947|Drosophila melanogaster CG17299-PB,
isoform B protein.
Length = 947
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = +2
Query: 242 RPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 421
RP +D K+ P A T + S GTG A + GG +GQGA
Sbjct: 235 RPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAAAAAGQGAA 294
Query: 422 GNMCRGGRM 448
G GG M
Sbjct: 295 GG--AGGLM 301
>AE014297-2943|AAN13851.1| 947|Drosophila melanogaster CG17299-PA,
isoform A protein.
Length = 947
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = +2
Query: 242 RPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 421
RP +D K+ P A T + S GTG A + GG +GQGA
Sbjct: 235 RPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAAAAAGQGAA 294
Query: 422 GNMCRGGRM 448
G GG M
Sbjct: 295 GG--AGGLM 301
>AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p
protein.
Length = 872
Score = 30.7 bits (66), Expect = 2.8
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 355 TCCRP-NSACPWWWYS*VRSGC 417
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-PB,
isoform B protein.
Length = 271
Score = 30.7 bits (66), Expect = 2.8
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 355 TCCRP-NSACPWWWYS*VRSGC 417
TCC P ++ CPW WY +GC
Sbjct: 117 TCCMPCSNQCPWSWYYNPCTGC 138
>AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA,
isoform A protein.
Length = 872
Score = 30.7 bits (66), Expect = 2.8
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 355 TCCRP-NSACPWWWYS*VRSGC 417
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AE014298-2541|AAS65393.1| 95|Drosophila melanogaster CG5172-PB,
isoform B protein.
Length = 95
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 386 GGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAA 514
GGG GQG++G GG T WRRW RR+ +RR +
Sbjct: 59 GGGHGGGGQGSYG----GGSQGKWT--WRRWPRRLAEERRRCS 95
>AE014298-2542|AAF48711.1| 133|Drosophila melanogaster CG5172-PA,
isoform A protein.
Length = 133
Score = 29.9 bits (64), Expect = 4.9
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2
Query: 386 GGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRR 508
GGG GQG++G GG T WRRW RR+ +RR
Sbjct: 59 GGGHGGGGQGSYG----GGSQGKWT--WRRWPRRLAEERRR 93
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,560,042
Number of Sequences: 53049
Number of extensions: 903539
Number of successful extensions: 4297
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4154
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4291240668
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -