Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_B14
(869 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14973-1|AAA85661.1| 56|Homo sapiens ribosomal protein S29 pro... 108 2e-23
L31610-1|AAB27426.1| 56|Homo sapiens protein ( Homo sapiens (c... 108 2e-23
BC035313-1|AAH35313.1| 56|Homo sapiens ribosomal protein S29 p... 108 2e-23
BC032813-1|AAH32813.1| 56|Homo sapiens ribosomal protein S29 p... 108 2e-23
AB061847-1|BAB79485.1| 56|Homo sapiens ribosomal protein S29 p... 108 2e-23
AB007165-1|BAA25827.1| 26|Homo sapiens ribosomal protein S29 p... 54 9e-07
BC065551-1|AAH65551.1| 440|Homo sapiens WAS/WASL interacting pr... 30 9.5
AJ431177-1|CAD24007.1| 440|Homo sapiens WIRE protein protein. 30 9.5
AB043786-1|BAB85113.1| 440|Homo sapiens WICH protein. 30 9.5
>U14973-1|AAA85661.1| 56|Homo sapiens ribosomal protein S29
protein.
Length = 56
Score = 108 bits (260), Expect = 2e-23
Identities = 44/56 (78%), Positives = 51/56 (91%)
Frame = +1
Query: 124 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 291
MGH +++SHPR++GQGSRSCR CSNRHGLIRKYGLN+CRQCFR+YA DIGF KLD
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56
>L31610-1|AAB27426.1| 56|Homo sapiens protein ( Homo sapiens
(clone cori-1cl5) S29 ribosomal protein mRNA, complete
cds. ).
Length = 56
Score = 108 bits (260), Expect = 2e-23
Identities = 44/56 (78%), Positives = 51/56 (91%)
Frame = +1
Query: 124 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 291
MGH +++SHPR++GQGSRSCR CSNRHGLIRKYGLN+CRQCFR+YA DIGF KLD
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56
>BC035313-1|AAH35313.1| 56|Homo sapiens ribosomal protein S29
protein.
Length = 56
Score = 108 bits (260), Expect = 2e-23
Identities = 44/56 (78%), Positives = 51/56 (91%)
Frame = +1
Query: 124 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 291
MGH +++SHPR++GQGSRSCR CSNRHGLIRKYGLN+CRQCFR+YA DIGF KLD
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56
>BC032813-1|AAH32813.1| 56|Homo sapiens ribosomal protein S29
protein.
Length = 56
Score = 108 bits (260), Expect = 2e-23
Identities = 44/56 (78%), Positives = 51/56 (91%)
Frame = +1
Query: 124 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 291
MGH +++SHPR++GQGSRSCR CSNRHGLIRKYGLN+CRQCFR+YA DIGF KLD
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56
>AB061847-1|BAB79485.1| 56|Homo sapiens ribosomal protein S29
protein.
Length = 56
Score = 108 bits (260), Expect = 2e-23
Identities = 44/56 (78%), Positives = 51/56 (91%)
Frame = +1
Query: 124 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 291
MGH +++SHPR++GQGSRSCR CSNRHGLIRKYGLN+CRQCFR+YA DIGF KLD
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56
>AB007165-1|BAA25827.1| 26|Homo sapiens ribosomal protein S29
protein.
Length = 26
Score = 53.6 bits (123), Expect = 9e-07
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +1
Query: 208 GLIRKYGLNICRQCFREYAHDIGFKK 285
GLIRKYGLN+CRQCFR+YA DIGF K
Sbjct: 1 GLIRKYGLNMCRQCFRQYAKDIGFIK 26
>BC065551-1|AAH65551.1| 440|Homo sapiens WAS/WASL interacting
protein family, member 2 protein.
Length = 440
Score = 30.3 bits (65), Expect = 9.5
Identities = 24/79 (30%), Positives = 30/79 (37%), Gaps = 9/79 (11%)
Frame = +3
Query: 657 PPPGERXFAFWAPLPV------SXXQ*TPWPPVP---XXGGXXGXPXPPKGGNXXXSPXI 809
PPPG R A PLP+ + + P PP P G G P PP I
Sbjct: 180 PPPGRRANAPPTPLPMHSSKAPAYNREKPLPPTPGQRLHPGREGPPAPPPVKPPPSPVNI 239
Query: 810 RGXPPGKNXXXXKXPQKGP 866
R P G++ P + P
Sbjct: 240 RTGPSGQSLAPPPPPYRQP 258
>AJ431177-1|CAD24007.1| 440|Homo sapiens WIRE protein protein.
Length = 440
Score = 30.3 bits (65), Expect = 9.5
Identities = 24/79 (30%), Positives = 30/79 (37%), Gaps = 9/79 (11%)
Frame = +3
Query: 657 PPPGERXFAFWAPLPV------SXXQ*TPWPPVP---XXGGXXGXPXPPKGGNXXXSPXI 809
PPPG R A PLP+ + + P PP P G G P PP I
Sbjct: 180 PPPGRRANAPPTPLPMHSSKAPAYNREKPLPPTPGQRLHPGREGPPAPPPVKPPPSPVNI 239
Query: 810 RGXPPGKNXXXXKXPQKGP 866
R P G++ P + P
Sbjct: 240 RTGPSGQSLAPPPPPYRQP 258
>AB043786-1|BAB85113.1| 440|Homo sapiens WICH protein.
Length = 440
Score = 30.3 bits (65), Expect = 9.5
Identities = 24/79 (30%), Positives = 30/79 (37%), Gaps = 9/79 (11%)
Frame = +3
Query: 657 PPPGERXFAFWAPLPV------SXXQ*TPWPPVP---XXGGXXGXPXPPKGGNXXXSPXI 809
PPPG R A PLP+ + + P PP P G G P PP I
Sbjct: 180 PPPGRRANAPPTPLPMHSSKAPAYNREKPLPPTPGQRLHPGREGPPAPPPVKPPPSPVNI 239
Query: 810 RGXPPGKNXXXXKXPQKGP 866
R P G++ P + P
Sbjct: 240 RTGPSGQSLAPPPPPYRQP 258
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,297,275
Number of Sequences: 237096
Number of extensions: 2301253
Number of successful extensions: 5249
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4991
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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