Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_B12
(873 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192 250 8e-67
03_01_0382 + 2961665-2961672,2962504-2962557,2962935-2963004,296... 250 8e-67
11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511 249 2e-66
03_03_0147 + 14838707-14838734,14839316-14839430,14839464-148396... 145 4e-35
07_03_1357 - 25982861-25983068,25983354-25983361 52 8e-07
07_03_1358 - 25984897-25984997,25985623-25985650 47 2e-05
04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028 33 0.39
02_05_0230 + 27029725-27030871,27030995-27031113,27031225-270313... 32 0.52
07_03_0615 + 19983003-19983238,19983297-19983558,19983651-199839... 31 0.91
06_01_0324 - 2357432-2357724,2358042-2358105,2358321-2358404,235... 29 4.9
02_05_1008 - 33461225-33462334 29 4.9
10_06_0085 + 10511258-10512327,10512978-10513058,10513318-105133... 29 6.4
03_06_0358 + 33366265-33366447,33367371-33367468,33367910-333689... 28 8.5
03_06_0069 - 31449319-31450368 28 8.5
02_04_0492 - 23424745-23425890 28 8.5
01_06_0939 - 33188620-33189252,33189570-33189680,33190460-331906... 28 8.5
01_05_0433 - 22094784-22095659 28 8.5
>11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192
Length = 195
Score = 250 bits (613), Expect = 8e-67
Identities = 116/175 (66%), Positives = 144/175 (82%)
Frame = +2
Query: 116 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDP 295
+ KT+ PRRP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P
Sbjct: 10 YGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNP 69
Query: 296 KRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARI 475
+R+FEG ALLRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+
Sbjct: 70 RRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARV 129
Query: 476 LIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGTCQEEEPPQGTG 640
LIRQRHIRV +Q+VNIPSF+VR++S KHIDFSL SPFGGG PG + + + +G
Sbjct: 130 LIRQRHIRVGRQIVNIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKKASG 184
>03_01_0382 +
2961665-2961672,2962504-2962557,2962935-2963004,
2963141-2963386,2967246-2967491,2968837-2968888,
2969270-2969651,2970527-2970681,2971389-2971713,
2975803-2975871,2976189-2976346,2976444-2976551,
2976659-2977131
Length = 781
Score = 250 bits (613), Expect = 8e-67
Identities = 116/175 (66%), Positives = 144/175 (82%)
Frame = +2
Query: 116 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDP 295
+ KT+ PRRP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P
Sbjct: 226 YGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNP 285
Query: 296 KRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARI 475
+R+FEG ALLRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+
Sbjct: 286 RRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARV 345
Query: 476 LIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGTCQEEEPPQGTG 640
LIRQRHIRV +Q+VNIPSF+VR++S KHIDFSL SPFGGG PG + + + +G
Sbjct: 346 LIRQRHIRVGRQIVNIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKKASG 400
>11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511
Length = 218
Score = 249 bits (610), Expect = 2e-66
Identities = 116/173 (67%), Positives = 143/173 (82%)
Frame = +2
Query: 122 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKR 301
KT+ PRRP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P+R
Sbjct: 35 KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRR 94
Query: 302 LFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILI 481
+FEG ALLRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+LI
Sbjct: 95 IFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARVLI 154
Query: 482 RQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGTCQEEEPPQGTG 640
RQRHIRV +Q+VNIPSF+VR++S KHIDFSL SPFGGG PG + + + +G
Sbjct: 155 RQRHIRVGRQIVNIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKKASG 207
>03_03_0147 +
14838707-14838734,14839316-14839430,14839464-14839697,
14840571-14840667
Length = 157
Score = 145 bits (352), Expect = 4e-35
Identities = 74/127 (58%), Positives = 91/127 (71%)
Frame = +2
Query: 116 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDP 295
+ KT+ PRRP+EK R D ELK+ GEYGLR+K E+WRV+ ELLTL+EK+P
Sbjct: 10 YGKTFKKPRRPYEKERPDAELKLYGEYGLRSKCELWRVQ-----------ELLTLDEKNP 58
Query: 296 KRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARI 475
+R+FEG ALLR + R G+L E Q KLDYVL L +E+FL+ RLQT VFK G KSIHH +
Sbjct: 59 RRIFEGEALLRHMNRYGLLGEGQNKLDYVLALTVENFLQCRLQTIVFKNGTVKSIHHDHV 118
Query: 476 LIRQRHI 496
LIRQ HI
Sbjct: 119 LIRQHHI 125
>07_03_1357 - 25982861-25983068,25983354-25983361
Length = 71
Score = 51.6 bits (118), Expect = 8e-07
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +2
Query: 497 RVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGG 592
RV +Q+VNIPSFIVRL+S KHI FSL SP GG
Sbjct: 3 RVGRQLVNIPSFIVRLESEKHIAFSLTSPLGG 34
>07_03_1358 - 25984897-25984997,25985623-25985650
Length = 42
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +2
Query: 116 FSKTYVTPRRPFEKARLDQELKIIGEYG 199
+ KT+ PRRP+EK RLD ELK++GEYG
Sbjct: 10 YGKTFKKPRRPYEKERLDAELKLVGEYG 37
>04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028
Length = 157
Score = 32.7 bits (71), Expect = 0.39
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Frame = +2
Query: 278 LEEKDPKRLFEGNALL-RRLVRIGVLDEKQMKLDYVLGLKIEDFLE---RRLQTQVFKAG 445
L E+D + + G L+ ++LV I KQM ++ D L RRL T + K
Sbjct: 37 LVERDDYKKYNGICLMVQKLVNI----IKQMDPRDPYRAEMTDMLLDKLRRLATVMVKLK 92
Query: 446 LAKSIHHARILIRQRHIRVRKQVVNIPSFIV 538
A+ + A I+Q H+RV + V P+F+V
Sbjct: 93 FAEHLKEAVTYIQQGHVRVGPETVTDPAFLV 123
>02_05_0230 +
27029725-27030871,27030995-27031113,27031225-27031349,
27031491-27031590,27031680-27031757,27032818-27032901,
27033077-27033162,27033869-27034049,27034596-27034646
Length = 656
Score = 32.3 bits (70), Expect = 0.52
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -2
Query: 182 SSTLGQDVPFQKDDEVSRTSLKIPTVLCCSPSWRARTHCSPIRIRKANLK 33
S+ +D F++DD S + +PT LC S S A + S + K+NL+
Sbjct: 190 STEFKKDQSFRRDDNHSSQTRNMPTELCTSSSEEAHIYESSLHGTKSNLE 239
>07_03_0615 +
19983003-19983238,19983297-19983558,19983651-19983906,
19983982-19984044,19984131-19984570
Length = 418
Score = 31.5 bits (68), Expect = 0.91
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -1
Query: 645 RHPVPCGGSSS*HVP-GRPPPNGDFREKSMCLPESRR 538
R PVP G + HVP PPP+G FR P S R
Sbjct: 229 RPPVPTGPRPAAHVPRPTPPPHGGFRAPFSTPPSSAR 265
>06_01_0324 -
2357432-2357724,2358042-2358105,2358321-2358404,
2358638-2358715,2359298-2359360,2359459-2359561,
2359675-2359800,2360212-2360258,2361284-2361388,
2361483-2361605,2361759-2361854,2362052-2362141,
2362759-2362815,2362899-2363028,2363613-2363708,
2363815-2363875,2364391-2364490
Length = 571
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 412 ASSADAGVQSWPGEVHPSCQNFDPAKAYSCPQASCEHPIIYCA 540
A+S G SW CQ++DPAK Y+ Q H I+ A
Sbjct: 394 AASLVKGNLSWRSREFLDCQSYDPAKVYNFIQTGV-HGRIFAA 435
>02_05_1008 - 33461225-33462334
Length = 369
Score = 29.1 bits (62), Expect = 4.9
Identities = 24/81 (29%), Positives = 44/81 (54%)
Frame = +2
Query: 356 EKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFI 535
E Q+ L+Y+ G +E RR+ ++ F A +A+ + + +RHI V + + PS +
Sbjct: 163 ELQILLEYMDGGSLEG---RRIASEAFLADVARQVLSGIAYLHRRHI-VHRDIK--PSNL 216
Query: 536 VRLDSGKHIDFSLKSPFGGGR 598
+ +DSG+ + + FG GR
Sbjct: 217 L-IDSGRRVKI---ADFGVGR 233
>10_06_0085 +
10511258-10512327,10512978-10513058,10513318-10513396,
10514160-10514201
Length = 423
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 395 IEDFLERRLQTQVFKAGLAKSIHHAR 472
+ED+ E L T F A L KS+H AR
Sbjct: 110 VEDYFEGSLHTLDFLAALDKSLHRAR 135
>03_06_0358 +
33366265-33366447,33367371-33367468,33367910-33368945,
33369042-33369554,33370456-33370644,33370715-33370848,
33371196-33371358
Length = 771
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 485 QRHIRVRKQVVNIPSFIVR-LDSGKHIDFSLKSPFGGGRPGTCQEEEPPQGTGW 643
+R + + +++ S ++R L G HID G GT +++EP + W
Sbjct: 103 ERELLSVRNLLSTQSALIRGLSEGVHIDSLTTGSEGSAEEGTDEDQEPSEIQNW 156
>03_06_0069 - 31449319-31450368
Length = 349
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -2
Query: 467 HDGWTSPGQL*TPASADDAPRSPQSSDQAHNRVSSVFHPVLQYE 336
HD +S G L P+SA +P + SDQ H VS+ P Y+
Sbjct: 237 HDVLSSLG-LKLPSSASSSPAASYYSDQLHAVVSNAGRPQAPYD 279
>02_04_0492 - 23424745-23425890
Length = 381
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 155 FQKDDEVSRTSLKIPTVLCCSPSWRARTHCSPIRIRKANL 36
+ K +++ T +K+P C + R T CSP I +A+L
Sbjct: 80 YHKCFQIADTLVKVPNARICCSTGRRLTLCSPKSILQADL 119
>01_06_0939 -
33188620-33189252,33189570-33189680,33190460-33190668,
33190781-33191078
Length = 416
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 170 QELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 292
Q L+ I G+ + +E++ + +L RIR R LT+E D
Sbjct: 212 QRLQTIHLLGIDDNQEIFTTQTSLTRIRAVPRYSLTIESLD 252
>01_05_0433 - 22094784-22095659
Length = 291
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -1
Query: 606 VPGRPPPNGDFREKSMCLPESRRTINDGMFTTC 508
VPGR PP +R K M P RR G C
Sbjct: 47 VPGRVPPPPMYRPKPMQAPARRRRSRRGWCCAC 79
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,549,914
Number of Sequences: 37544
Number of extensions: 429393
Number of successful extensions: 1134
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1132
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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