Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_B12
(873 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 316 9e-86
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 316 9e-86
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 316 9e-86
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 316 9e-86
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 316 9e-86
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 316 9e-86
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 316 9e-86
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 316 9e-86
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 309 8e-84
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 298 2e-80
BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 196 9e-50
AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9 pr... 126 1e-28
BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleola... 60 1e-08
BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleola... 60 1e-08
AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein. 60 1e-08
AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3 hom... 60 1e-08
AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens ... 60 1e-08
AF314142-1|AAM15526.1| 847|Homo sapiens apical protein 2 protein. 35 0.44
BC104916-1|AAI04917.1| 852|Homo sapiens SHROOM1 protein protein. 34 0.58
BC104914-1|AAI04915.1| 852|Homo sapiens SHROOM1 protein protein. 34 0.58
AB075840-1|BAB85546.1| 871|Homo sapiens KIAA1960 protein protein. 34 0.58
AY219711-1|AAP21093.1| 2595|Homo sapiens ABCA12 transporter subf... 32 3.1
AY033486-1|AAK54355.1| 2277|Homo sapiens ATP-binding cassette tr... 32 3.1
AF418105-1|AAN40735.1| 2347|Homo sapiens ATP-binding cassette tr... 32 3.1
AC072062-1|AAY24276.1| 2413|Homo sapiens unknown protein. 32 3.1
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 316 bits (775), Expect = 9e-86
Identities = 150/176 (85%), Positives = 164/176 (93%)
Frame = +2
Query: 113 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 292
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 293 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 472
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 473 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGTCQEEEPPQGTG 640
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPG + + +G G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQG 183
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 316 bits (775), Expect = 9e-86
Identities = 150/176 (85%), Positives = 164/176 (93%)
Frame = +2
Query: 113 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 292
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 293 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 472
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 473 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGTCQEEEPPQGTG 640
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPG + + +G G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQG 183
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 316 bits (775), Expect = 9e-86
Identities = 150/176 (85%), Positives = 164/176 (93%)
Frame = +2
Query: 113 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 292
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 293 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 472
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 473 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGTCQEEEPPQGTG 640
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPG + + +G G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQG 183
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 316 bits (775), Expect = 9e-86
Identities = 150/176 (85%), Positives = 164/176 (93%)
Frame = +2
Query: 113 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 292
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 293 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 472
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 473 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGTCQEEEPPQGTG 640
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPG + + +G G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQG 183
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 316 bits (775), Expect = 9e-86
Identities = 150/176 (85%), Positives = 164/176 (93%)
Frame = +2
Query: 113 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 292
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 293 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 472
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 473 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGTCQEEEPPQGTG 640
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPG + + +G G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQG 183
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 316 bits (775), Expect = 9e-86
Identities = 150/176 (85%), Positives = 164/176 (93%)
Frame = +2
Query: 113 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 292
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 293 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 472
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 473 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGTCQEEEPPQGTG 640
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPG + + +G G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQG 183
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 316 bits (775), Expect = 9e-86
Identities = 150/176 (85%), Positives = 164/176 (93%)
Frame = +2
Query: 113 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 292
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 293 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 472
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 473 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGTCQEEEPPQGTG 640
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPG + + +G G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQG 183
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 316 bits (775), Expect = 9e-86
Identities = 150/176 (85%), Positives = 164/176 (93%)
Frame = +2
Query: 113 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 292
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 293 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 472
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 473 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGTCQEEEPPQGTG 640
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPG + + +G G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQG 183
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 309 bits (759), Expect = 8e-84
Identities = 148/176 (84%), Positives = 162/176 (92%)
Frame = +2
Query: 113 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 292
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 293 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 472
P+RLFEGNALLRRLVR+GVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRLGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 473 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGTCQEEEPPQGTG 640
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP G GRPG + + +G G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPTGVGRPGRVKRKNAKKGQG 183
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 298 bits (731), Expect = 2e-80
Identities = 144/176 (81%), Positives = 158/176 (89%)
Frame = +2
Query: 113 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 292
V KTYVTPRR FEK+RLDQELK+I EYGLRNKREVWRVK+TLA+IRKAARELLTL++KD
Sbjct: 8 VCRKTYVTPRRSFEKSRLDQELKLIEEYGLRNKREVWRVKFTLAKIRKAARELLTLDQKD 67
Query: 293 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 472
P+RLFEGNALL RLV IGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLWRLVCIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 473 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGTCQEEEPPQGTG 640
+LIRQRH RVRKQVVNIPSFIVRLDS KHIDFSL SP+GGGRPG + + +G G
Sbjct: 128 VLIRQRHFRVRKQVVNIPSFIVRLDSQKHIDFSLCSPYGGGRPGRVKRKNAKKGQG 183
>BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein.
Length = 113
Score = 196 bits (478), Expect = 9e-50
Identities = 93/103 (90%), Positives = 100/103 (97%)
Frame = +2
Query: 287 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 466
+DP+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH
Sbjct: 5 EDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 64
Query: 467 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGG 595
AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGG
Sbjct: 65 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGG 107
>AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9
protein.
Length = 64
Score = 126 bits (304), Expect = 1e-28
Identities = 57/63 (90%), Positives = 63/63 (100%)
Frame = +2
Query: 122 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKR 301
KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+R
Sbjct: 2 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 61
Query: 302 LFE 310
LFE
Sbjct: 62 LFE 64
>BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 59.7 bits (138), Expect = 1e-08
Identities = 36/122 (29%), Positives = 61/122 (50%)
Frame = +2
Query: 173 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 352
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 353 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 532
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 533 IV 538
+V
Sbjct: 149 LV 150
>BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 59.7 bits (138), Expect = 1e-08
Identities = 36/122 (29%), Positives = 61/122 (50%)
Frame = +2
Query: 173 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 352
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 353 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 532
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 533 IV 538
+V
Sbjct: 149 LV 150
>AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein.
Length = 184
Score = 59.7 bits (138), Expect = 1e-08
Identities = 36/122 (29%), Positives = 61/122 (50%)
Frame = +2
Query: 173 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 352
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 353 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 532
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 533 IV 538
+V
Sbjct: 149 LV 150
>AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3
homolog protein.
Length = 184
Score = 59.7 bits (138), Expect = 1e-08
Identities = 36/122 (29%), Positives = 61/122 (50%)
Frame = +2
Query: 173 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 352
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 353 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 532
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 533 IV 538
+V
Sbjct: 149 LV 150
>AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ10968 fis, clone PLACE1000863, moderately
similar to PUTATIVE MITOCHONDRIAL 40S RIBOSOMAL PROTEIN
YHR148W. ).
Length = 184
Score = 59.7 bits (138), Expect = 1e-08
Identities = 36/122 (29%), Positives = 61/122 (50%)
Frame = +2
Query: 173 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 352
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 353 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 532
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 533 IV 538
+V
Sbjct: 149 LV 150
>AF314142-1|AAM15526.1| 847|Homo sapiens apical protein 2 protein.
Length = 847
Score = 34.7 bits (76), Expect = 0.44
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Frame = +2
Query: 239 LARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLK--IEDFLE 412
LAR+R+A + + D +RL RL++ D K++K ++V + + + L
Sbjct: 723 LARVRRALARAASDSDPDEQRL--------RLLQRQEEDAKELK-EHVARRERAVREVLV 773
Query: 413 RRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGG 592
R L + + A A +L +QR++ R +++ +R D G H SP
Sbjct: 774 RALPVEELRVYCALLAGKAAVLAQQRNLDERIRLLQDQLDAIRDDLGHHAP----SPSPA 829
Query: 593 GRPGTCQEEEPP 628
PGTC +PP
Sbjct: 830 RPPGTCPPVQPP 841
>BC104916-1|AAI04917.1| 852|Homo sapiens SHROOM1 protein protein.
Length = 852
Score = 34.3 bits (75), Expect = 0.58
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 3/133 (2%)
Frame = +2
Query: 239 LARIRKAARELLTLEEKDPKRLFEGNALLR-RLVRIGVLDEKQMKLDYVLGLK--IEDFL 409
LAR+R+A + + DP + + L R RL++ D K++K ++V + + + L
Sbjct: 723 LARVRRALARAAS--DSDPDE--QASLLQRLRLLQRQEEDAKELK-EHVARRERAVREVL 777
Query: 410 ERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFG 589
R L + + A A +L +QR++ R +++ +R D G H SP
Sbjct: 778 VRALPVEELRVYCALLAGKAAVLAQQRNLDERIRLLQDQLDAIRDDLGHHAP----SPSP 833
Query: 590 GGRPGTCQEEEPP 628
PGTC +PP
Sbjct: 834 ARPPGTCPPVQPP 846
>BC104914-1|AAI04915.1| 852|Homo sapiens SHROOM1 protein protein.
Length = 852
Score = 34.3 bits (75), Expect = 0.58
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 3/133 (2%)
Frame = +2
Query: 239 LARIRKAARELLTLEEKDPKRLFEGNALLR-RLVRIGVLDEKQMKLDYVLGLK--IEDFL 409
LAR+R+A + + DP + + L R RL++ D K++K ++V + + + L
Sbjct: 723 LARVRRALARAAS--DSDPDE--QASLLQRLRLLQRQEEDAKELK-EHVARRERAVREVL 777
Query: 410 ERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFG 589
R L + + A A +L +QR++ R +++ +R D G H SP
Sbjct: 778 VRALPVEELRVYCALLAGKAAVLAQQRNLDERIRLLQDQLDAIRDDLGHHAP----SPSP 833
Query: 590 GGRPGTCQEEEPP 628
PGTC +PP
Sbjct: 834 ARPPGTCPPVQPP 846
>AB075840-1|BAB85546.1| 871|Homo sapiens KIAA1960 protein protein.
Length = 871
Score = 34.3 bits (75), Expect = 0.58
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 3/133 (2%)
Frame = +2
Query: 239 LARIRKAARELLTLEEKDPKRLFEGNALLR-RLVRIGVLDEKQMKLDYVLGLK--IEDFL 409
LAR+R+A + + DP + + L R RL++ D K++K ++V + + + L
Sbjct: 742 LARVRRALARAAS--DSDPDE--QASLLQRLRLLQRQEEDAKELK-EHVARRERAVREVL 796
Query: 410 ERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFG 589
R L + + A A +L +QR++ R +++ +R D G H SP
Sbjct: 797 VRALPVEELRVYCALLAGKAAVLAQQRNLDERIRLLQDQLDAIRDDLGHHAP----SPSP 852
Query: 590 GGRPGTCQEEEPP 628
PGTC +PP
Sbjct: 853 ARPPGTCPPVQPP 865
>AY219711-1|AAP21093.1| 2595|Homo sapiens ABCA12 transporter subfamily
A protein.
Length = 2595
Score = 31.9 bits (69), Expect = 3.1
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -2
Query: 311 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 153
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 998 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 1056
Query: 152 QKDDEVSRTSLKIPTVL 102
KD+ ++ S +P VL
Sbjct: 1057 MKDNFLTSVSYSLPIVL 1073
>AY033486-1|AAK54355.1| 2277|Homo sapiens ATP-binding cassette
transporter family A member 12 protein.
Length = 2277
Score = 31.9 bits (69), Expect = 3.1
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -2
Query: 311 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 153
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 680 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 738
Query: 152 QKDDEVSRTSLKIPTVL 102
KD+ ++ S +P VL
Sbjct: 739 MKDNFLTSVSYSLPIVL 755
>AF418105-1|AAN40735.1| 2347|Homo sapiens ATP-binding cassette
transporter family A member 12 protein.
Length = 2347
Score = 31.9 bits (69), Expect = 3.1
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -2
Query: 311 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 153
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 750 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 808
Query: 152 QKDDEVSRTSLKIPTVL 102
KD+ ++ S +P VL
Sbjct: 809 MKDNFLTSVSYSLPIVL 825
>AC072062-1|AAY24276.1| 2413|Homo sapiens unknown protein.
Length = 2413
Score = 31.9 bits (69), Expect = 3.1
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -2
Query: 311 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 153
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 998 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 1056
Query: 152 QKDDEVSRTSLKIPTVL 102
KD+ ++ S +P VL
Sbjct: 1057 MKDNFLTSVSYSLPIVL 1073
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,734,259
Number of Sequences: 237096
Number of extensions: 2362590
Number of successful extensions: 5652
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 5347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5637
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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