Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_B09
(904 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 33 0.37
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.65
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.65
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.65
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 31 1.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.6
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.6
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.6
Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 3.4
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 29 6.0
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 32.7 bits (71), Expect = 0.37
Identities = 32/118 (27%), Positives = 36/118 (30%), Gaps = 5/118 (4%)
Frame = +3
Query: 528 PPXPXXXXKKYPSXXXXXPPXXXGXXXXXXPPHPXKXX--PXXXPPPXXXXXS*RXXXRP 701
PP P + PS P G PP P P PP S
Sbjct: 196 PPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGG 255
Query: 702 PPXLFS---SPARGXXKKPLXXXGGPPXEKKKNXXPPXLXXXXXKPPSPXXPXLPFSP 866
PP F+ +P G P G PP + PP PPS P PF P
Sbjct: 256 PPGPFNPSGAPPSGGPPGPFDPSGAPP-----SGGPPGPFDPSGAPPSGGPPG-PFDP 307
Score = 32.7 bits (71), Expect = 0.37
Identities = 33/122 (27%), Positives = 35/122 (28%), Gaps = 7/122 (5%)
Frame = +3
Query: 528 PPXPXXXXKKYPSXXXXXPPXXXGXXXXXXPPHPX--KXXPXXXPPPXXXXXS*RXXXRP 701
PP P PS P G PP P P PP S
Sbjct: 301 PPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGG 360
Query: 702 PPXLFS---SPARGXXKKPLXXXGGPPXEKKKNXXPPXLXXXXXKPPS--PXXPXLPFSP 866
PP F +P G P G PP + PP PPS P P P
Sbjct: 361 PPGPFDPSGAPPSGGPPGPFDPSGAPP-----SGGPPGPFDPSGAPPSGGPPGPFNPSGA 415
Query: 867 PP 872
PP
Sbjct: 416 PP 417
Score = 31.9 bits (69), Expect = 0.65
Identities = 33/122 (27%), Positives = 36/122 (29%), Gaps = 7/122 (5%)
Frame = +3
Query: 528 PPXPXXXXKKYPSXXXXXPPXXXGXXXXXXPPHPXKXX--PXXXPPPXXXXXS*RXXXRP 701
PP P PS P G PP P P PP S
Sbjct: 286 PPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGG 345
Query: 702 PPXLFS---SPARGXXKKPLXXXGGPPXEKKKNXXPPXLXXXXXKPPS--PXXPXLPFSP 866
PP F+ +P G P G PP + PP PPS P P P
Sbjct: 346 PPGPFNPSGAPPSGGPPGPFDPSGAPP-----SGGPPGPFDPSGAPPSGGPPGPFDPSGA 400
Query: 867 PP 872
PP
Sbjct: 401 PP 402
Score = 31.1 bits (67), Expect = 1.1
Identities = 32/127 (25%), Positives = 34/127 (26%), Gaps = 5/127 (3%)
Frame = +3
Query: 528 PPXPXXXXKKYPSXXXXXPPXXXGXXXXXXPPHPXKXX--PXXXPPPXXXXXS*RXXXRP 701
PP P PS P G PP P P PP S
Sbjct: 421 PPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGG 480
Query: 702 PPXLFS---SPARGXXKKPLXXXGGPPXEKKKNXXPPXLXXXXXKPPSPXXPXLPFSPPP 872
PP F +P G P G PP P PP P LP P
Sbjct: 481 PPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGMPPVPLPTDLPI---P 537
Query: 873 XKXKXFF 893
+ FF
Sbjct: 538 SESPSFF 544
Score = 28.3 bits (60), Expect = 7.9
Identities = 32/122 (26%), Positives = 34/122 (27%), Gaps = 7/122 (5%)
Frame = +3
Query: 528 PPXPXXXXKKYPSXXXXXPPXXXGXXXXXXPPHPX--KXXPXXXPPPXXXXXS*RXXXRP 701
PP P PS P G PP P PP S
Sbjct: 271 PPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGG 330
Query: 702 PPXLFS---SPARGXXKKPLXXXGGPPXEKKKNXXPPXLXXXXXKPPS--PXXPXLPFSP 866
PP F +P G P G PP + PP PPS P P P
Sbjct: 331 PPGPFDPSGAPPSGGPPGPFNPSGAPP-----SGGPPGPFDPSGAPPSGGPPGPFDPSGA 385
Query: 867 PP 872
PP
Sbjct: 386 PP 387
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.65
Identities = 34/132 (25%), Positives = 36/132 (27%)
Frame = +3
Query: 477 PXPXXXQGXXXXFXXFXPPXPXXXXKKYPSXXXXXPPXXXGXXXXXXPPHPXKXXPXXXP 656
P P +G PP P P PP G PP P P P
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP----PPPPAGGSP---P 290
Query: 657 PPXXXXXS*RXXXRPPPXLFSSPARGXXKKPLXXXGGPPXEKKKNXXPPXLXXXXXKPPS 836
PP PPP SP G P G PP + PP S
Sbjct: 291 PPRAGSPP------PPPPPRGSPPTGSLPPP-QAGGSPPPAGTGSPPPPPRQKRQAPERS 343
Query: 837 PXXPXLPFSPPP 872
P P PP
Sbjct: 344 PPTGSPPTGSPP 355
Score = 31.5 bits (68), Expect = 0.85
Identities = 22/83 (26%), Positives = 23/83 (27%), Gaps = 1/83 (1%)
Frame = +3
Query: 627 PXKXXPXXXPPPXXXXXS*RXXXRPPPXLFSSPARGXXKKPLXXXGGPPXEKKKNXXPPX 806
P P PP + PPP S P P G PP PP
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Query: 807 LXXXXXKPPSP-XXPXLPFSPPP 872
PP P P PPP
Sbjct: 293 RAGSPPPPPPPRGSPPTGSLPPP 315
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/62 (33%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Frame = +3
Query: 699 PPPXLFSSPARGXXKKPLXXXGGPPXEKKKNXXPPXLXXXXXKPP--SPXXPXLPFSPPP 872
PPP P +G PL G PP PP PP SP P SPPP
Sbjct: 237 PPPP---PPPKG--SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
Query: 873 XK 878
+
Sbjct: 292 PR 293
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.65
Identities = 34/132 (25%), Positives = 36/132 (27%)
Frame = +3
Query: 477 PXPXXXQGXXXXFXXFXPPXPXXXXKKYPSXXXXXPPXXXGXXXXXXPPHPXKXXPXXXP 656
P P +G PP P P PP G PP P P P
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP----PPPPAGGSP---P 311
Query: 657 PPXXXXXS*RXXXRPPPXLFSSPARGXXKKPLXXXGGPPXEKKKNXXPPXLXXXXXKPPS 836
PP PPP SP G P G PP + PP S
Sbjct: 312 PPRAGSPP------PPPPPRGSPPTGSLPPP-QAGGSPPPAGTGSPPPPPRQKRQAPERS 364
Query: 837 PXXPXLPFSPPP 872
P P PP
Sbjct: 365 PPTGSPPTGSPP 376
Score = 31.5 bits (68), Expect = 0.85
Identities = 22/83 (26%), Positives = 23/83 (27%), Gaps = 1/83 (1%)
Frame = +3
Query: 627 PXKXXPXXXPPPXXXXXS*RXXXRPPPXLFSSPARGXXKKPLXXXGGPPXEKKKNXXPPX 806
P P PP + PPP S P P G PP PP
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Query: 807 LXXXXXKPPSP-XXPXLPFSPPP 872
PP P P PPP
Sbjct: 314 RAGSPPPPPPPRGSPPTGSLPPP 336
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/62 (33%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Frame = +3
Query: 699 PPPXLFSSPARGXXKKPLXXXGGPPXEKKKNXXPPXLXXXXXKPP--SPXXPXLPFSPPP 872
PPP P +G PL G PP PP PP SP P SPPP
Sbjct: 258 PPPP---PPPKG--SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
Query: 873 XK 878
+
Sbjct: 313 PR 314
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.65
Identities = 34/132 (25%), Positives = 36/132 (27%)
Frame = +3
Query: 477 PXPXXXQGXXXXFXXFXPPXPXXXXKKYPSXXXXXPPXXXGXXXXXXPPHPXKXXPXXXP 656
P P +G PP P P PP G PP P P P
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP----PPPPAGGSP---P 296
Query: 657 PPXXXXXS*RXXXRPPPXLFSSPARGXXKKPLXXXGGPPXEKKKNXXPPXLXXXXXKPPS 836
PP PPP SP G P G PP + PP S
Sbjct: 297 PPRAGSPP------PPPPPRGSPPTGSLPPP-QAGGSPPPAGTGSPPPPPRQKRQAPERS 349
Query: 837 PXXPXLPFSPPP 872
P P PP
Sbjct: 350 PPTGSPPTGSPP 361
Score = 31.5 bits (68), Expect = 0.85
Identities = 22/83 (26%), Positives = 23/83 (27%), Gaps = 1/83 (1%)
Frame = +3
Query: 627 PXKXXPXXXPPPXXXXXS*RXXXRPPPXLFSSPARGXXKKPLXXXGGPPXEKKKNXXPPX 806
P P PP + PPP S P P G PP PP
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Query: 807 LXXXXXKPPSP-XXPXLPFSPPP 872
PP P P PPP
Sbjct: 299 RAGSPPPPPPPRGSPPTGSLPPP 321
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/62 (33%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Frame = +3
Query: 699 PPPXLFSSPARGXXKKPLXXXGGPPXEKKKNXXPPXLXXXXXKPP--SPXXPXLPFSPPP 872
PPP P +G PL G PP PP PP SP P SPPP
Sbjct: 243 PPPP---PPPKG--SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
Query: 873 XK 878
+
Sbjct: 298 PR 299
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 31.1 bits (67), Expect = 1.1
Identities = 30/115 (26%), Positives = 35/115 (30%), Gaps = 1/115 (0%)
Frame = -1
Query: 868 GGEKGRXGXXGDGGFXXXXXRXGGXXFFFFSXGGPPXXXXGFFXXPRAGXEKXXGGGRXX 689
GG G G G GG GG + GG G+ G GG
Sbjct: 88 GGFNGGYGQGGYGGGGDFGGGMGGGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGY 147
Query: 688 XL*EXXXSXGGGXXXGXXFXGWGGXXXXXXPXXXGGXXXXXDGYF-XXXXXGFGG 527
+ GGG G F G+GG GG G F G+GG
Sbjct: 148 GM----GGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGG 198
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/80 (26%), Positives = 21/80 (26%)
Frame = +3
Query: 654 PPPXXXXXS*RXXXRPPPXLFSSPARGXXKKPLXXXGGPPXEKKKNXXPPXLXXXXXKPP 833
PPP PPP P G P G PP PP PP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 834 SPXXPXLPFSPPPXKXKXFF 893
P PPP F
Sbjct: 774 PPPPGGFKGGPPPPPPPGMF 793
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 3/49 (6%)
Frame = +2
Query: 581 PPXXGGXXXXXXXPPPXKXXP---XVXPPPXXXXXFLKXXAXPPPXXLF 718
PP GG PPP P PPP F PPP +F
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/80 (26%), Positives = 21/80 (26%)
Frame = +3
Query: 654 PPPXXXXXS*RXXXRPPPXLFSSPARGXXKKPLXXXGGPPXEKKKNXXPPXLXXXXXKPP 833
PPP PPP P G P G PP PP PP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 834 SPXXPXLPFSPPPXKXKXFF 893
P PPP F
Sbjct: 774 PPPPGGFKGGPPPPPPPGMF 793
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 3/49 (6%)
Frame = +2
Query: 581 PPXXGGXXXXXXXPPPXKXXP---XVXPPPXXXXXFLKXXAXPPPXXLF 718
PP GG PPP P PPP F PPP +F
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/80 (26%), Positives = 21/80 (26%)
Frame = +3
Query: 654 PPPXXXXXS*RXXXRPPPXLFSSPARGXXKKPLXXXGGPPXEKKKNXXPPXLXXXXXKPP 833
PPP PPP P G P G PP PP PP
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Query: 834 SPXXPXLPFSPPPXKXKXFF 893
P PPP F
Sbjct: 357 PPPPGGFKGGPPPPPPPGMF 376
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 3/49 (6%)
Frame = +2
Query: 581 PPXXGGXXXXXXXPPPXKXXP---XVXPPPXXXXXFLKXXAXPPPXXLF 718
PP GG PPP P PPP F PPP +F
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 376
>Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical
protein ZC376.8 protein.
Length = 278
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +3
Query: 765 GPPXEKKKNXXPPXLXXXXXKPPSPXXPXLPFSPPP 872
G P +KK P PP+P P P +PPP
Sbjct: 35 GKPKKKKDVSGAPSAESPPPPPPAPKVPEPPKAPPP 70
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = -1
Query: 388 GGXGGX-PXXLXXXGPPGXFFXXXXGXXGXXXXPPXXXXXGGXPPXXFXXLG 236
GG GG P G PG + G G PP G PP F +G
Sbjct: 404 GGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVG 455
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 28.7 bits (61), Expect = 6.0
Identities = 23/88 (26%), Positives = 27/88 (30%), Gaps = 3/88 (3%)
Frame = +3
Query: 618 PPHPXKXXPXXXPPPXXXXXS*RXXXRPPPXL---FSSPARGXXKKPLXXXGGPPXEKKK 788
P + + P PPP PPP F P P GPP +
Sbjct: 88 PVYHNQGPPRGYPPPPPQGAD-TWRGAPPPAHHGHFGPPGHHFQGPPQHFPPGPP--RPH 144
Query: 789 NXXPPXLXXXXXKPPSPXXPXLPFSPPP 872
PP P P P P +PPP
Sbjct: 145 FPGPPGPHRPPEHYPGPPRPQAPAAPPP 172
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,028,517
Number of Sequences: 27780
Number of extensions: 190909
Number of successful extensions: 707
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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