Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_B08
         (864 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271466-1|CAB69047.1|  341|Caenorhabditis elegans fructose-1,6-...   118   5e-27
AC006670-1|AAF39910.1|  341|Caenorhabditis elegans Fructose-1,6-...   118   5e-27
AF039045-11|AAB94202.1|  259|Caenorhabditis elegans Hypothetical...    30   1.9  
AC084158-26|AAM15621.2|  216|Caenorhabditis elegans Hypothetical...    28   7.5  
AC084158-25|AAM15620.2|  384|Caenorhabditis elegans Hypothetical...    28   7.5  

>AJ271466-1|CAB69047.1|  341|Caenorhabditis elegans
           fructose-1,6-bisphosphatase protein.
          Length = 341

 Score =  118 bits (284), Expect = 5e-27
 Identities = 57/89 (64%), Positives = 74/89 (83%)
 Frame = +3

Query: 165 DVNAMTLTRWVLAQQRTAPTATGDLTQLLNSIQTAVKAIQSAVRKAGIAKLHGISGDTNV 344
           + +++TL R+VL +QR    A+G+LT LL ++  A+KAI SA +KAG+AKL+GI+G TNV
Sbjct: 11  ETDSITLQRYVLQEQRKHADASGELTALLTNMLVAIKAIASATQKAGLAKLYGIAGATNV 70

Query: 345 QGEEVKKLDVLSNDLFINMLKSSFTTCLL 431
           QGEEVKKLDVLSN+L INMLKSS+TTCLL
Sbjct: 71  QGEEVKKLDVLSNELMINMLKSSYTTCLL 99



 Score = 77.8 bits (183), Expect = 9e-15
 Identities = 33/46 (71%), Positives = 41/46 (89%)
 Frame = +1

Query: 430 LVSEENQTVLQVETERRGKYVVCFDPLDGSSNIECLVSVGSIFAIY 567
           LVSEEN  +++VE +RRGKY+V FDPLDGSSNI+CLVS+G+IF IY
Sbjct: 99  LVSEENDELIEVEEQRRGKYIVTFDPLDGSSNIDCLVSIGTIFGIY 144


>AC006670-1|AAF39910.1|  341|Caenorhabditis elegans
           Fructose-1,6-biphosphatase protein1 protein.
          Length = 341

 Score =  118 bits (284), Expect = 5e-27
 Identities = 57/89 (64%), Positives = 74/89 (83%)
 Frame = +3

Query: 165 DVNAMTLTRWVLAQQRTAPTATGDLTQLLNSIQTAVKAIQSAVRKAGIAKLHGISGDTNV 344
           + +++TL R+VL +QR    A+G+LT LL ++  A+KAI SA +KAG+AKL+GI+G TNV
Sbjct: 11  ETDSITLQRYVLQEQRKHADASGELTALLTNMLVAIKAIASATQKAGLAKLYGIAGATNV 70

Query: 345 QGEEVKKLDVLSNDLFINMLKSSFTTCLL 431
           QGEEVKKLDVLSN+L INMLKSS+TTCLL
Sbjct: 71  QGEEVKKLDVLSNELMINMLKSSYTTCLL 99



 Score = 77.8 bits (183), Expect = 9e-15
 Identities = 33/46 (71%), Positives = 41/46 (89%)
 Frame = +1

Query: 430 LVSEENQTVLQVETERRGKYVVCFDPLDGSSNIECLVSVGSIFAIY 567
           LVSEEN  +++VE +RRGKY+V FDPLDGSSNI+CLVS+G+IF IY
Sbjct: 99  LVSEENDELIEVEEQRRGKYIVTFDPLDGSSNIDCLVSIGTIFGIY 144


>AF039045-11|AAB94202.1|  259|Caenorhabditis elegans Hypothetical
           protein F15E11.5 protein.
          Length = 259

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +1

Query: 358 SKNWTSFPTTSSSTCLNPHLPHVSLVSEENQTVL 459
           S+N   FPT  S+ C +   P+ + ++EEN TVL
Sbjct: 48  SENADLFPTNCSTVCADIQFPYNNDLTEENLTVL 81


>AC084158-26|AAM15621.2|  216|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.32b protein.
          Length = 216

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -2

Query: 278 SLHSGLYRV*ELSQVPGGSRRRPLLRENPPCQRHSVDIESRPLLCH 141
           SL +G YRV   S    G  RRP    +P    +S D++ RPL  H
Sbjct: 31  SLINGTYRVTSTSNEHVGQFRRPRYSADP--TSNSTDLQLRPLDAH 74


>AC084158-25|AAM15620.2|  384|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.32a protein.
          Length = 384

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -2

Query: 278 SLHSGLYRV*ELSQVPGGSRRRPLLRENPPCQRHSVDIESRPLLCH 141
           SL +G YRV   S    G  RRP    +P    +S D++ RPL  H
Sbjct: 199 SLINGTYRVTSTSNEHVGQFRRPRYSADP--TSNSTDLQLRPLDAH 242


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,240,651
Number of Sequences: 27780
Number of extensions: 289870
Number of successful extensions: 809
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)