Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_B05
(875 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical p... 114 7e-26
U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 33 0.27
AC006617-4|AAF39771.1| 291|Caenorhabditis elegans Hypothetical ... 30 2.5
AF101316-3|AAC69232.2| 508|Caenorhabditis elegans Hypothetical ... 29 3.3
U49954-5|AAA93427.2| 445|Caenorhabditis elegans Odorant respons... 29 4.4
U49954-4|AAN84809.1| 473|Caenorhabditis elegans Odorant respons... 29 4.4
U49954-3|AAN84808.1| 475|Caenorhabditis elegans Odorant respons... 29 4.4
AF055911-1|AAC39022.1| 445|Caenorhabditis elegans odorant respo... 29 4.4
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p... 29 5.8
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr... 29 5.8
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. 29 5.8
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p... 28 7.6
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p... 28 7.6
U40958-3|ABQ13075.1| 219|Caenorhabditis elegans Hypothetical pr... 28 7.6
>Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical
protein F25H2.11 protein.
Length = 181
Score = 114 bits (275), Expect = 7e-26
Identities = 53/113 (46%), Positives = 77/113 (68%), Gaps = 2/113 (1%)
Frame = +1
Query: 124 MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEA--DEGT 297
M IYKDI T DE+ SD++ MKLVD+++YE G+ V R +G+I + G NPSAEE D+G+
Sbjct: 1 MLIYKDIFTDDELSSDSFPMKLVDDLVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGS 60
Query: 298 DSAVESGVDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVEV 456
D VE G+DIVLNH+LVE + D + Y+K +MK ++ +E+ D+ +V
Sbjct: 61 DEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNVIDHMEKNNRDKADV 113
Score = 46.4 bits (105), Expect = 3e-05
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Frame = +2
Query: 503 FKELQFFTGESMDC---DGMVAMMEYRDFDGTQIPIMMFFKHGLEEEK 637
FK L FF GE +G VA++EYRD DGT++P +M K + EEK
Sbjct: 133 FKNLAFFIGERAAEGAENGQVAIIEYRDVDGTEVPTLMLVKEAIIEEK 180
>U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical
protein EEED8.16 protein.
Length = 590
Score = 33.1 bits (72), Expect = 0.27
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 5/104 (4%)
Frame = +1
Query: 157 EMFSDTYKMKLVDEVIYEVTG-----RLVTRAQGDIQIEGFNPSAEEADEGTDSAVESGV 321
E+ S TY +K+ E +++ G RL+ +E S D+ +
Sbjct: 343 ELTSHTYSLKVGGERVWDYAGDNYVHRLIENGADGKLVEYQRESNASFDDKNQKGGDKLE 402
Query: 322 DIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVE 453
I L + L+ T D++ Y L+ M++ ++K+E+ A QVE
Sbjct: 403 GIKLEYTLLLTSQLEDQRKYFEGLRHDMEQTMSKMEKTAYAQVE 446
>AC006617-4|AAF39771.1| 291|Caenorhabditis elegans Hypothetical
protein C39B5.7 protein.
Length = 291
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 713 SIMSASWQELASLITRLNNFVFKKYTAYNNKIITS 817
+ M A++ +LAS++ + FVF+ Y+ + ITS
Sbjct: 84 NFMRAAFNDLASVLKNVKKFVFQNYSKVKQQAITS 118
>AF101316-3|AAC69232.2| 508|Caenorhabditis elegans Hypothetical
protein F52F10.2 protein.
Length = 508
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 477 FVHVCFKYFNLVRRLLFQFCY*FFHI 400
F+++C +Y RR L FCY F I
Sbjct: 137 FIYLCIEYLPTGRRYLMMFCYILFDI 162
>U49954-5|AAA93427.2| 445|Caenorhabditis elegans Odorant response
abnormal protein4, isoform a protein.
Length = 445
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/46 (21%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -3
Query: 171 VREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFSPQQ-TKPGKQIL 37
++ HL+ + ++LH++ +E ++ ++ K G + Q +P +L
Sbjct: 299 IKHHLVRNLFARVELHYESMEVVEEERSPKTGITVHQLPRPATTVL 344
>U49954-4|AAN84809.1| 473|Caenorhabditis elegans Odorant response
abnormal protein4, isoform c protein.
Length = 473
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/46 (21%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -3
Query: 171 VREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFSPQQ-TKPGKQIL 37
++ HL+ + ++LH++ +E ++ ++ K G + Q +P +L
Sbjct: 327 IKHHLVRNLFARVELHYESMEVVEEERSPKTGITVHQLPRPATTVL 372
>U49954-3|AAN84808.1| 475|Caenorhabditis elegans Odorant response
abnormal protein4, isoform b protein.
Length = 475
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/46 (21%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -3
Query: 171 VREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFSPQQ-TKPGKQIL 37
++ HL+ + ++LH++ +E ++ ++ K G + Q +P +L
Sbjct: 329 IKHHLVRNLFARVELHYESMEVVEEERSPKTGITVHQLPRPATTVL 374
>AF055911-1|AAC39022.1| 445|Caenorhabditis elegans odorant response
protein ODR-4 protein.
Length = 445
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/46 (21%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -3
Query: 171 VREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFSPQQ-TKPGKQIL 37
++ HL+ + ++LH++ +E ++ ++ K G + Q +P +L
Sbjct: 299 IKHHLVRNLFARVELHYESMEVVEEERSPKTGITVHQLPRPATTVL 344
>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 370 KKSYTLYLKDYMKKLVAKLEEK 435
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 370 KKSYTLYLKDYMKKLVAKLEEK 435
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 370 KKSYTLYLKDYMKKLVAKLEEK 435
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 262 FNPSAEEADEGTDSAVESG-VDIVLNH 339
F+PSA +ADE D A E G VD L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262
>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 262 FNPSAEEADEGTDSAVESG-VDIVLNH 339
F+PSA +ADE D A E G VD L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262
>U40958-3|ABQ13075.1| 219|Caenorhabditis elegans Hypothetical
protein F09F9.5 protein.
Length = 219
Score = 28.3 bits (60), Expect = 7.6
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 429 FQFCY*FFHIVFEVQCVGFLVTEGVCF 349
+Q C+ F H+ +GF GVCF
Sbjct: 53 YQTCFGFMHVKIATCSIGFFALLGVCF 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,809,657
Number of Sequences: 27780
Number of extensions: 364510
Number of successful extensions: 1043
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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