Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_B03
(885 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical ... 76 4e-14
U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical pr... 74 2e-13
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 32 0.63
Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical p... 31 0.83
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 31 0.83
AF106584-6|AAC78220.1| 424|Caenorhabditis elegans Hypothetical ... 31 0.83
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 31 1.4
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 31 1.4
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 30 1.9
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 2.5
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 2.5
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 2.5
AF100656-8|AAF99965.1| 210|Caenorhabditis elegans Hypothetical ... 30 2.5
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 3.3
U53153-9|AAC69041.1| 511|Caenorhabditis elegans Hypothetical pr... 29 4.4
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 29 4.4
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 4.4
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 7.7
U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase prot... 28 7.7
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 28 7.7
>AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical
protein Y62E10A.1 protein.
Length = 110
Score = 75.8 bits (178), Expect = 4e-14
Identities = 46/112 (41%), Positives = 55/112 (49%)
Frame = +2
Query: 125 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 304
MRYV+AYLLAVLGG P D++ ILS+VG++AD E K V++ L GK VE+LIA G
Sbjct: 1 MRYVSAYLLAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSA 60
Query: 305 KLSSMPVGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 460
L S V GG MGFGLFD
Sbjct: 61 GLVS--VSGGAAPAAAAAPAAGGAAPAADSKPAKKEEPKEESDDDMGFGLFD 110
>U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical
protein C37A2.7 protein.
Length = 107
Score = 73.7 bits (173), Expect = 2e-13
Identities = 33/69 (47%), Positives = 47/69 (68%)
Frame = +2
Query: 125 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 304
M+Y+ AYLLA LGG +P+A DV K+L + G++ D E V+ L GK + ++IA G+
Sbjct: 1 MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKV 60
Query: 305 KLSSMPVGG 331
KLSS+P GG
Sbjct: 61 KLSSVPSGG 69
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.9 bits (69), Expect = 0.63
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 568 PPPPXPPXPXXXXPPPXHXXPXXXGSPFS 654
PPPP PP P PPP P P S
Sbjct: 576 PPPPPPPPPMLGGPPPPPPPPGGLMGPAS 604
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = +1
Query: 568 PPPPXPPXP--XXXXPPPXHXXPXXXGSP 648
PPPP PP P PPP P G P
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLGGP 589
>Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 31.5 bits (68), Expect = 0.83
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +2
Query: 170 TTPAAADVEKILSSVGIEADGEKLKKVITEL-NGKDVEQLI 289
+TPA+A +I + GI EK+ +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484
>Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 31.5 bits (68), Expect = 0.83
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +2
Query: 170 TTPAAADVEKILSSVGIEADGEKLKKVITEL-NGKDVEQLI 289
+TPA+A +I + GI EK+ +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 31.5 bits (68), Expect = 0.83
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = +1
Query: 568 PPPPXPPXPXXXXPPPXHXXPXXXGSPFSXG*LAPXPDXXP 690
PPP PP P PPP P P+ P P+ P
Sbjct: 50 PPPFGPPPPWDRPPPPWRRPPWHRRPPWGLPPPPPPPEPEP 90
>AF106584-6|AAC78220.1| 424|Caenorhabditis elegans Hypothetical
protein F54A5.1 protein.
Length = 424
Score = 31.5 bits (68), Expect = 0.83
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = -1
Query: 333 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLP 163
P P SRP+AI +TS S + + PS S P+ L +F+ + GV LP
Sbjct: 340 PSPAVSTFEVSRPSAIISATSSTTSPISIPATIIPSVS-PSALELFAMAQQLGVQLP 395
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 568 PPPPXPPXPXXXXPPPXHXXP 630
PPPP PP P PPP P
Sbjct: 2 PPPPPPPPPPPPPPPPAASAP 22
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 568 PPPPXPPXPXXXXPPP 615
PPPP PP P PPP
Sbjct: 9 PPPPPPPPPAASAPPP 24
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 568 PPPPXPPXPXXXXPPPXHXXP 630
PPPP PP P PPP P
Sbjct: 2 PPPPPPPPPPPPPPPPAASAP 22
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 568 PPPPXPPXPXXXXPPP 615
PPPP PP P PPP
Sbjct: 9 PPPPPPPPPAASAPPP 24
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 574 PPXPPXPXXXXPPPXHXXPXXXGSP 648
PP PP P PPP H P P
Sbjct: 20 PPPPPSPRRAPPPPPHRKPASLSPP 44
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 568 PPPPXPPXPXXXXPPP 615
PPPP PP P PPP
Sbjct: 63 PPPPPPPPPPMCPPPP 78
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 568 PPPPXPPXPXXXXPPP 615
PPPP PP P PPP
Sbjct: 64 PPPPPPPPPMCPPPPP 79
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 568 PPPPXPPXPXXXXPPP 615
PPPP PP P PPP
Sbjct: 72 PPPPPPPMPCPPPPPP 87
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 568 PPPPXPPXPXXXXPPP 615
PPPP PP P PPP
Sbjct: 85 PPPPPPPPPTLKAPPP 100
>AF100656-8|AAF99965.1| 210|Caenorhabditis elegans Hypothetical
protein F49F1.9 protein.
Length = 210
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 559 HXXPPPPXPPXPXXXXPPPXHXXPXXXGSPFSXG*LAPXP 678
H P PP PP P P P G PF G P P
Sbjct: 49 HRPPRPPRPPRPPRPTPKPVENMETLHG-PFGPGVRYPIP 87
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 571 PPPXPPXPXXXXPPPXHXXP 630
PPP PP P PPP + P
Sbjct: 132 PPPPPPPPHYPPPPPHYPPP 151
>U53153-9|AAC69041.1| 511|Caenorhabditis elegans Hypothetical
protein T19A5.5 protein.
Length = 511
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +3
Query: 51 SC*RLFKTNVILSALHVSCQLGLKKCVTWPRIYWLC 158
+C F+ + H CQ G +CV PR W C
Sbjct: 40 ACAAFFRRVFVTHKQHFKCQTGQNQCVPDPRGRWNC 75
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = -1
Query: 285 SCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPSTASKYAAT*RIF*VLI 109
S +T+ P ++T + P +S PT + ST+ AA V+ T+S + + +F VLI
Sbjct: 2254 SVATAGPTGPILTVV---PVSSAPTSGAVSSTATAAPVITTTKTSSVLSVSFSMFIVLI 2309
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 647 GDPXXXGXLWXGGGXXXXGXGGXGGGG 567
G+ G W GGG G GG GGG
Sbjct: 106 GNNNGGGGNWGGGGNNDGGWGGNNGGG 132
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 637 GXRXXCGVXGXXXXXGGGGXXGGXGC 560
G CG G GGGG GG GC
Sbjct: 80 GGGGGCGGGGGGCGGGGGGCGGGGGC 105
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 622 CGVXGXXXXXGGGGXXGGXGC 560
CG G GGGG GG GC
Sbjct: 65 CGGGGGGCGGGGGGCGGGGGC 85
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 568 PPPPXPPXPXXXXPPPXHXXPXXXGSPFSXG 660
PPPP PP PP P G P G
Sbjct: 40 PPPPPPPCGGGYEAPPPPPPPSYAGGPSYAG 70
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -2
Query: 653 LKGDPXXXGXLWXGGGXXXXGXGGXGGGG 567
+ DP G GG G GG GGGG
Sbjct: 773 IPNDPTLGGPTGSSGGGGGGGNGGSGGGG 801
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 622 CGVXGXXXXXGGGGXXGGXGC 560
CG G GGGG GG GC
Sbjct: 83 CGGGGGGCGGGGGGCGGGGGC 103
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 622 CGVXGXXXXXGGGGXXGGXGC 560
CG G GGGG GG GC
Sbjct: 83 CGGGGGGCGGGGGGCGGGGGC 103
>U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase protein
4 protein.
Length = 751
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -2
Query: 689 GXLSGXGAN*PXLKGDPXXXGXLWXGGGXXXXGXGGXGGGG 567
G G G N G+ G GGG G GG GGGG
Sbjct: 688 GDNGGWGGNGGGGWGNNDPWGGSRWGGGRGGWGGGGWGGGG 728
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 629 GXLWXGGGXXXXGXGGXGGGG 567
G W G G G GG GGGG
Sbjct: 78 GGNWGGNGGGGNGGGGRGGGG 98
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,306,322
Number of Sequences: 27780
Number of extensions: 256809
Number of successful extensions: 2408
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1891
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -