Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_B01
         (854 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0317 - 22265786-22267618,22267874-22268446,22268546-222686...    30   2.7  
01_01_1013 - 8015552-8015613,8016898-8018035                           30   2.7  
11_01_0750 - 6315126-6315896,6316371-6316784                           29   4.7  

>09_06_0317 -
           22265786-22267618,22267874-22268446,22268546-22268677,
           22268931-22269137,22269287-22269388,22270742-22271032
          Length = 1045

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3

Query: 366 TLEPPLPQGFPLSLPWTVHRLQTRXK 289
           +L PPLP G PLS P+     QT  K
Sbjct: 751 SLRPPLPPGLPLSSPFVCPTTQTSEK 776


>01_01_1013 - 8015552-8015613,8016898-8018035
          Length = 399

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
 Frame = +2

Query: 212 ILKESYNLADDKNVIASPLGVMLL-LSLXRVWSRCTVQGRDKGNPWGRGGSRVN-THIRI 385
           I K  +++AD   ++ S    +L+  S+  +W+   V    +  PWG  G  V+ T +  
Sbjct: 153 ITKTIFHVADLHPIVGSDKAALLIYFSVPEIWATHVVDYPPRDRPWGGNGVVVHKTIVWW 212

Query: 386 IKSALRXIRPEILDCRQ*NIRFRPV 460
           +  +   +  +I   RQ N+RF P+
Sbjct: 213 VDLSYGLLSCDISARRQ-NLRFVPL 236


>11_01_0750 - 6315126-6315896,6316371-6316784
          Length = 394

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
 Frame = +3

Query: 384 LLNQRYAXFDPKFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFX-APXNAADII 557
           +L  R     P+ L  A  ++      L+  F   A N++ S     +F   P +A D I
Sbjct: 88  VLRDRSTSGGPR-LAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQI 146

Query: 558 NRWADEQTQGHIKTPVSEXXID 623
           N W  + T+G + T +    ID
Sbjct: 147 NSWVKDSTKGTVTTLLPAGTID 168


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,575,499
Number of Sequences: 37544
Number of extensions: 438143
Number of successful extensions: 1010
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)