Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_B01
         (854 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein...    35   0.064
AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or cys...    35   0.064
AF000198-2|AAB53055.2|  748|Caenorhabditis elegans Hypothetical ...    28   7.4  

>U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein 6
           protein.
          Length = 375

 Score = 35.1 bits (77), Expect = 0.064
 Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 3/108 (2%)
 Frame = +3

Query: 306 AGAQSKEEIREILGGGEAQEST--HTYGLLNQRYAXFDPKFLTVANKIYVSDQYKLADAF 479
           A  ++++EIR+ L  G   E    H   +            + VAN I+    + +   +
Sbjct: 52  AKGETRDEIRKALLNGATDEELEQHFSNISAGLLVAEKGTEVNVANHIFSRKTFTIKKLY 111

Query: 480 -SRTANLFRSEVDNINFXAPXNAADIINRWADEQTQGHIKTPVSEXXI 620
            +    L+ +    +NF     +A+ IN +  E T+GHIK  ++   I
Sbjct: 112 LNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDSI 159


>AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 375

 Score = 35.1 bits (77), Expect = 0.064
 Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 3/108 (2%)
 Frame = +3

Query: 306 AGAQSKEEIREILGGGEAQEST--HTYGLLNQRYAXFDPKFLTVANKIYVSDQYKLADAF 479
           A  ++++EIR+ L  G   E    H   +            + VAN I+    + +   +
Sbjct: 52  AKGETRDEIRKALLNGATDEELEQHFSNISAGLLVAEKGTEVNVANHIFSRKTFTIKKLY 111

Query: 480 -SRTANLFRSEVDNINFXAPXNAADIINRWADEQTQGHIKTPVSEXXI 620
            +    L+ +    +NF     +A+ IN +  E T+GHIK  ++   I
Sbjct: 112 LNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDSI 159


>AF000198-2|AAB53055.2|  748|Caenorhabditis elegans Hypothetical
           protein T28F2.4a protein.
          Length = 748

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 19/61 (31%), Positives = 29/61 (47%)
 Frame = +2

Query: 86  QPVMDKLLLLVTLVCGTQAFYMFGHEFSRTRLGDAIDKTSLKILKESYNLADDKNVIASP 265
           Q   DK      LV   +    FG+ FS  RLG+ ++K  L+    + N+A  KN + + 
Sbjct: 318 QTFFDKFYQSNVLVVRRKQPTYFGNLFSTARLGELLEKNHLE-YGRNINIAQYKNGVRTT 376

Query: 266 L 268
           L
Sbjct: 377 L 377


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,383,279
Number of Sequences: 27780
Number of extensions: 341630
Number of successful extensions: 769
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)