Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_A22
         (900 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0157 - 14547645-14547935                                         36   0.058
12_02_0998 + 25126114-25126596,25129213-25129339,25129349-251294...    28   8.8  

>12_02_0157 - 14547645-14547935
          Length = 96

 Score = 35.5 bits (78), Expect = 0.058
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +1

Query: 205 IITLFSIVGFVWGYIVQQFSQSVYXXXXXXXXXXXXTVPPWPMYRRNPLNW 357
           ++   ++  FV GY +  F   +             TVP WP + R+PL W
Sbjct: 16  LLVASAVAAFVVGYAMADFQLMLLVYAGGVVLTALVTVPNWPFFNRHPLKW 66


>12_02_0998 +
           25126114-25126596,25129213-25129339,25129349-25129459,
           25130122-25130270,25130356-25130643,25130753-25130941,
           25131445-25131619,25132219-25132316
          Length = 539

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 797 PPPPGEXXXSPPIWGAPSRLP 859
           P PP +    PP WG PS +P
Sbjct: 301 PMPPPQTWGPPPPWGHPSNVP 321


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,015,740
Number of Sequences: 37544
Number of extensions: 426301
Number of successful extensions: 1010
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)