Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_A18
(921 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC087079-6|AAK27864.1| 111|Caenorhabditis elegans Ribosomal pro... 112 3e-25
U89307-1|AAB48625.1| 111|Caenorhabditis elegans ribosomal prote... 109 4e-24
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 38 0.010
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 38 0.010
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 38 0.010
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 36 0.054
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 36 0.054
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 33 0.38
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 33 0.38
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.38
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.38
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.38
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 32 0.66
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 32 0.66
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 32 0.66
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 0.88
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 0.88
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 0.88
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 0.88
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 0.88
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 31 1.5
AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen prot... 31 1.5
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 31 1.5
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 30 2.0
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 30 2.0
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81030-5|CAB02709.1| 324|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 29 4.7
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 29 4.7
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.7
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 29 4.7
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 29 4.7
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 6.2
U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical pr... 29 6.2
U80836-5|AAB37892.2| 621|Caenorhabditis elegans Hypothetical pr... 29 6.2
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 6.2
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 6.2
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 6.2
AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical ... 29 6.2
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 6.2
AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen prot... 29 6.2
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 8.2
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 8.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 8.2
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 28 8.2
>AC087079-6|AAK27864.1| 111|Caenorhabditis elegans Ribosomal
protein, acidic protein 1 protein.
Length = 111
Score = 112 bits (270), Expect = 3e-25
Identities = 58/112 (51%), Positives = 70/112 (62%)
Frame = +2
Query: 152 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 331
M S ELACVY+ALIL DD+VA+TGEKI+T+LKAA V+ EPYWPGLFAKALEG++V++LI
Sbjct: 1 MASNQELACVYAALILQDDEVAITGEKIATLLKAANVEFEPYWPGLFAKALEGVDVKNLI 60
Query: 332 TNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 487
T++ SG SDDDMGFGLFD
Sbjct: 61 TSVSSGA-GSGPAPAAAAAAPAAGGAAPAAETKKKEEPKEESDDDMGFGLFD 111
>U89307-1|AAB48625.1| 111|Caenorhabditis elegans ribosomal protein
P1 homolog protein.
Length = 111
Score = 109 bits (261), Expect = 4e-24
Identities = 57/112 (50%), Positives = 69/112 (61%)
Frame = +2
Query: 152 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 331
M S ELACVY+ALIL DD+VA+TGEKI+T+LKAA V+ EP WPGLFAKALEG++V++LI
Sbjct: 1 MASNQELACVYAALILQDDEVAITGEKIATLLKAANVEFEPNWPGLFAKALEGVDVKNLI 60
Query: 332 TNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 487
T++ SG SDDDMGFGLFD
Sbjct: 61 TSVSSGA-GSGPAPAAAAAAPAAGGAAPAAETKKKEEPKEESDDDMGFGLFD 111
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 37.9 bits (84), Expect = 0.010
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +1
Query: 595 PXXXPPXPPPXXXXXXXXGPGAPXXPPTXGGXXXPPKXXXXXXPXXXPXPXP 750
P PP PPP G G+P PP G P P P P P
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 284
Score = 31.9 bits (69), Expect = 0.66
Identities = 26/102 (25%), Positives = 27/102 (26%), Gaps = 3/102 (2%)
Frame = +3
Query: 618 PPPXXXXXXXXXXGPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQP--XXXXXXXPXGX 791
PPP G P PP G P G P PP P P
Sbjct: 257 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ 316
Query: 792 XXGXXPXPXXGT-PXQPRXXXXXTXXXPPXPLXXXPXPPGXR 914
G P G+ P PR PP PP R
Sbjct: 317 AGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGR 358
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = +3
Query: 732 GPPXPPXQPXXXXXXXPXGXXXGXXPXPXXGTPXQPRXXXXXTXXXPPXPLXXXPXPP 905
G P PP P P P P G+P PR T PP P P PP
Sbjct: 235 GSPPPPPPPKGSP---PLAGSGSPPPPPAAGSPPPPR-----TGSPPPPPTGSPPPPP 284
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +1
Query: 610 PXPPPXXXXXXXXGPGAPXXPPTXGGXXXPPKXXXXXXPXXXPXPXP 750
P PPP G+P PPT G PP P P P
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPT-GSPPPPPAGGSPPPPRAGSPPPP 300
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 37.9 bits (84), Expect = 0.010
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +1
Query: 595 PXXXPPXPPPXXXXXXXXGPGAPXXPPTXGGXXXPPKXXXXXXPXXXPXPXP 750
P PP PPP G G+P PP G P P P P P
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 305
Score = 31.9 bits (69), Expect = 0.66
Identities = 26/102 (25%), Positives = 27/102 (26%), Gaps = 3/102 (2%)
Frame = +3
Query: 618 PPPXXXXXXXXXXGPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQP--XXXXXXXPXGX 791
PPP G P PP G P G P PP P P
Sbjct: 278 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ 337
Query: 792 XXGXXPXPXXGT-PXQPRXXXXXTXXXPPXPLXXXPXPPGXR 914
G P G+ P PR PP PP R
Sbjct: 338 AGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGR 379
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = +3
Query: 732 GPPXPPXQPXXXXXXXPXGXXXGXXPXPXXGTPXQPRXXXXXTXXXPPXPLXXXPXPP 905
G P PP P P P P G+P PR T PP P P PP
Sbjct: 256 GSPPPPPPPKGSP---PLAGSGSPPPPPAAGSPPPPR-----TGSPPPPPTGSPPPPP 305
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +1
Query: 610 PXPPPXXXXXXXXGPGAPXXPPTXGGXXXPPKXXXXXXPXXXPXPXP 750
P PPP G+P PPT G PP P P P
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPT-GSPPPPPAGGSPPPPRAGSPPPP 321
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 37.9 bits (84), Expect = 0.010
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +1
Query: 595 PXXXPPXPPPXXXXXXXXGPGAPXXPPTXGGXXXPPKXXXXXXPXXXPXPXP 750
P PP PPP G G+P PP G P P P P P
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 290
Score = 31.9 bits (69), Expect = 0.66
Identities = 26/102 (25%), Positives = 27/102 (26%), Gaps = 3/102 (2%)
Frame = +3
Query: 618 PPPXXXXXXXXXXGPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQP--XXXXXXXPXGX 791
PPP G P PP G P G P PP P P
Sbjct: 263 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ 322
Query: 792 XXGXXPXPXXGT-PXQPRXXXXXTXXXPPXPLXXXPXPPGXR 914
G P G+ P PR PP PP R
Sbjct: 323 AGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGR 364
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = +3
Query: 732 GPPXPPXQPXXXXXXXPXGXXXGXXPXPXXGTPXQPRXXXXXTXXXPPXPLXXXPXPP 905
G P PP P P P P G+P PR T PP P P PP
Sbjct: 241 GSPPPPPPPKGSP---PLAGSGSPPPPPAAGSPPPPR-----TGSPPPPPTGSPPPPP 290
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +1
Query: 610 PXPPPXXXXXXXXGPGAPXXPPTXGGXXXPPKXXXXXXPXXXPXPXP 750
P PPP G+P PPT G PP P P P
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPT-GSPPPPPAGGSPPPPRAGSPPPP 306
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 35.5 bits (78), Expect = 0.054
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +3
Query: 657 GPPXPPYXGGXXGXPXTTXK-XXAXXGPPXPPXQPXXXXXXXPXG 788
GPP PP G G P + K A GPP PP Q P G
Sbjct: 180 GPPGPPGQAGAPGEPGSPAKSEPAVPGPPGPPGQAGQQGPPGPPG 224
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 35.5 bits (78), Expect = 0.054
Identities = 25/84 (29%), Positives = 27/84 (32%), Gaps = 10/84 (11%)
Frame = +3
Query: 618 PPPXXXXXXXXXXGPPXPPYXGGXXGXPXTTXKXXAXX-----GPPXPPXQPXXXXXXXP 782
PP GPP PP G G P + A GPP PP QP P
Sbjct: 136 PPQCPCTAAPGLGGPPGPPGQDGIPGNPGRNGEDGAPGPQGPSGPPGPPGQPGQPGQRGP 195
Query: 783 XG-----XXXGXXPXPXXGTPXQP 839
G G P G P +P
Sbjct: 196 PGEPGALLPGGDAPPGPSGPPGRP 219
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 32.7 bits (71), Expect = 0.38
Identities = 19/74 (25%), Positives = 22/74 (29%)
Frame = +3
Query: 618 PPPXXXXXXXXXXGPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQPXXXXXXXPXGXXX 797
PP GPP PP G G P + GPP P + P G
Sbjct: 202 PPGDDSIGGTGIKGPPGPPGPRGPKGPPGSNGLPSQNSGPPGPIGEMGPPGPPGPRGEPG 261
Query: 798 GXXPXPXXGTPXQP 839
P G +P
Sbjct: 262 PPGPFGPPGDSGEP 275
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 32.7 bits (71), Expect = 0.38
Identities = 19/74 (25%), Positives = 22/74 (29%)
Frame = +3
Query: 618 PPPXXXXXXXXXXGPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQPXXXXXXXPXGXXX 797
PP GPP PP G G P + GPP P + P G
Sbjct: 202 PPGDDSIGGTGIKGPPGPPGPRGPKGPPGSNGLPSQNSGPPGPIGEMGPPGPPGPRGEPG 261
Query: 798 GXXPXPXXGTPXQP 839
P G +P
Sbjct: 262 PPGPFGPPGDSGEP 275
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +1
Query: 607 PPXPPPXXXXXXXXGPGAPXXPPTXGGXXXPPKXXXXXXPXXXPXPXP 750
PP PPP G G P PP GG PP P P P
Sbjct: 742 PPPPPPPGGLPPISG-GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 31.9 bits (69), Expect = 0.66
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 4/50 (8%)
Frame = +1
Query: 607 PPXPPPXXXXXXXXGPGAPXXP----PTXGGXXXPPKXXXXXXPXXXPXP 744
PP PPP GP P P P GG PP P P P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 618 PPPXXXXXXXXXXGPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQP 758
PPP GPP PP G P G P PP P
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 29.9 bits (64), Expect = 2.7
Identities = 29/101 (28%), Positives = 29/101 (28%)
Frame = +3
Query: 606 PXXXPPPXXXXXXXXXXGPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQPXXXXXXXPX 785
P PP GPP PP GG P T GPP PP P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLP--PIT-------GGPPPPP----PPGGLPPI 754
Query: 786 GXXXGXXPXPXXGTPXQPRXXXXXTXXXPPXPLXXXPXPPG 908
P P G P P P P P PPG
Sbjct: 755 SGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP----PPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +1
Query: 607 PPXPPPXXXXXXXXGPGAPXXPPTXGGXXXPPKXXXXXXPXXXPXPXP 750
PP PPP G G P PP GG PP P P P
Sbjct: 742 PPPPPPPGGLPPISG-GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 31.9 bits (69), Expect = 0.66
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 4/50 (8%)
Frame = +1
Query: 607 PPXPPPXXXXXXXXGPGAPXXP----PTXGGXXXPPKXXXXXXPXXXPXP 744
PP PPP GP P P P GG PP P P P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 618 PPPXXXXXXXXXXGPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQP 758
PPP GPP PP G P G P PP P
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 29.9 bits (64), Expect = 2.7
Identities = 29/101 (28%), Positives = 29/101 (28%)
Frame = +3
Query: 606 PXXXPPPXXXXXXXXXXGPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQPXXXXXXXPX 785
P PP GPP PP GG P T GPP PP P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLP--PIT-------GGPPPPP----PPGGLPPI 754
Query: 786 GXXXGXXPXPXXGTPXQPRXXXXXTXXXPPXPLXXXPXPPG 908
P P G P P P P P PPG
Sbjct: 755 SGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP----PPPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +1
Query: 607 PPXPPPXXXXXXXXGPGAPXXPPTXGGXXXPPKXXXXXXPXXXPXPXP 750
PP PPP G G P PP GG PP P P P
Sbjct: 325 PPPPPPPGGLPPISG-GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 31.9 bits (69), Expect = 0.66
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 4/50 (8%)
Frame = +1
Query: 607 PPXPPPXXXXXXXXGPGAPXXP----PTXGGXXXPPKXXXXXXPXXXPXP 744
PP PPP GP P P P GG PP P P P
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 618 PPPXXXXXXXXXXGPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQP 758
PPP GPP PP G P G P PP P
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 29.9 bits (64), Expect = 2.7
Identities = 29/101 (28%), Positives = 29/101 (28%)
Frame = +3
Query: 606 PXXXPPPXXXXXXXXXXGPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQPXXXXXXXPX 785
P PP GPP PP GG P T GPP PP P
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLP--PIT-------GGPPPPP----PPGGLPPI 337
Query: 786 GXXXGXXPXPXXGTPXQPRXXXXXTXXXPPXPLXXXPXPPG 908
P P G P P P P P PPG
Sbjct: 338 SGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP----PPPPG 374
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 32.3 bits (70), Expect = 0.50
Identities = 21/60 (35%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Frame = +3
Query: 657 GPPXPPYXGGXXGXPXTT--XKXXAXXGPPXPPXQPXXXXXXXPXGXXXGXXPXPXXGTP 830
GPP PP G G P T GPP PP P P G G P G P
Sbjct: 208 GPPGPPGPKGPRGTPGPTGPKNFYITSGPPGPPGPP------GPPGNPGGIGPRGPPGDP 261
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 31.9 bits (69), Expect = 0.66
Identities = 25/97 (25%), Positives = 26/97 (26%), Gaps = 1/97 (1%)
Frame = +3
Query: 621 PPXXXXXXXXXXGPPXPPYXGGXXGXPXTTXKXXAXXGPPXP-PXQPXXXXXXXPXGXXX 797
PP GPP PP G G T + P P P P
Sbjct: 144 PPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPA 203
Query: 798 GXXPXPXXGTPXQPRXXXXXTXXXPPXPLXXXPXPPG 908
G P P P PP P P PPG
Sbjct: 204 GEPGTPAISEPLTPGAPGEPGDSGPPGP----PGPPG 236
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/78 (25%), Positives = 20/78 (25%)
Frame = +3
Query: 606 PXXXPPPXXXXXXXXXXGPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQPXXXXXXXPX 785
P P P GPP P G G P P PP P P
Sbjct: 88 PEVNPAPNLQCEGCCLPGPPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPC 147
Query: 786 GXXXGXXPXPXXGTPXQP 839
P P G P P
Sbjct: 148 KPCPQGPPGP-PGPPGAP 164
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +1
Query: 607 PPXPPPXXXXXXXXGPGAPXXPPTXGGXXXPPKXXXXXXPXXXPXP 744
PP PP GP P P G PP P P P
Sbjct: 228 PPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGVDGQSGPPGPPGP 273
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 31.9 bits (69), Expect = 0.66
Identities = 25/97 (25%), Positives = 26/97 (26%), Gaps = 1/97 (1%)
Frame = +3
Query: 621 PPXXXXXXXXXXGPPXPPYXGGXXGXPXTTXKXXAXXGPPXP-PXQPXXXXXXXPXGXXX 797
PP GPP PP G G T + P P P P
Sbjct: 139 PPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPA 198
Query: 798 GXXPXPXXGTPXQPRXXXXXTXXXPPXPLXXXPXPPG 908
G P P P PP P P PPG
Sbjct: 199 GEPGTPAISEPLTPGAPGEPGDSGPPGP----PGPPG 231
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/78 (25%), Positives = 20/78 (25%)
Frame = +3
Query: 606 PXXXPPPXXXXXXXXXXGPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQPXXXXXXXPX 785
P P P GPP P G G P P PP P P
Sbjct: 83 PEVNPAPNLQCEGCCLPGPPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPC 142
Query: 786 GXXXGXXPXPXXGTPXQP 839
P P G P P
Sbjct: 143 KPCPQGPPGP-PGPPGAP 159
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +1
Query: 607 PPXPPPXXXXXXXXGPGAPXXPPTXGGXXXPPKXXXXXXPXXXPXP 744
PP PP GP P P G PP P P P
Sbjct: 223 PPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPGP 268
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 31.9 bits (69), Expect = 0.66
Identities = 25/97 (25%), Positives = 26/97 (26%), Gaps = 1/97 (1%)
Frame = +3
Query: 621 PPXXXXXXXXXXGPPXPPYXGGXXGXPXTTXKXXAXXGPPXP-PXQPXXXXXXXPXGXXX 797
PP GPP PP G G T + P P P P
Sbjct: 139 PPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPA 198
Query: 798 GXXPXPXXGTPXQPRXXXXXTXXXPPXPLXXXPXPPG 908
G P P P PP P P PPG
Sbjct: 199 GEPGTPAISEPLTPGAPGEPGDSGPPGP----PGPPG 231
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/78 (25%), Positives = 20/78 (25%)
Frame = +3
Query: 606 PXXXPPPXXXXXXXXXXGPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQPXXXXXXXPX 785
P P P GPP P G G P P PP P P
Sbjct: 83 PEVNPAPNLQCEGCCLPGPPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPC 142
Query: 786 GXXXGXXPXPXXGTPXQP 839
P P G P P
Sbjct: 143 KPCPQGPPGP-PGPPGAP 159
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +1
Query: 607 PPXPPPXXXXXXXXGPGAPXXPPTXGGXXXPPKXXXXXXPXXXPXP 744
PP PP GP P P G PP P P P
Sbjct: 223 PPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPGP 268
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.5 bits (68), Expect = 0.88
Identities = 21/77 (27%), Positives = 22/77 (28%), Gaps = 2/77 (2%)
Frame = +3
Query: 657 GPPXPPYXGGXXGXPXTTXKXXAXXGPPX--PPXQPXXXXXXXPXGXXXGXXPXPXXGTP 830
G P P G G P K + P PP QP P G P G P
Sbjct: 114 GKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNP 173
Query: 831 XQPRXXXXXTXXXPPXP 881
P PP P
Sbjct: 174 GSPAGPSGPGPAGPPGP 190
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.5 bits (68), Expect = 0.88
Identities = 21/77 (27%), Positives = 22/77 (28%), Gaps = 2/77 (2%)
Frame = +3
Query: 657 GPPXPPYXGGXXGXPXTTXKXXAXXGPPX--PPXQPXXXXXXXPXGXXXGXXPXPXXGTP 830
G P P G G P K + P PP QP P G P G P
Sbjct: 114 GKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNP 173
Query: 831 XQPRXXXXXTXXXPPXP 881
P PP P
Sbjct: 174 GSPAGPSGPGPAGPPGP 190
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.5 bits (68), Expect = 0.88
Identities = 21/77 (27%), Positives = 22/77 (28%), Gaps = 2/77 (2%)
Frame = +3
Query: 657 GPPXPPYXGGXXGXPXTTXKXXAXXGPPX--PPXQPXXXXXXXPXGXXXGXXPXPXXGTP 830
G P P G G P K + P PP QP P G P G P
Sbjct: 114 GKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNP 173
Query: 831 XQPRXXXXXTXXXPPXP 881
P PP P
Sbjct: 174 GSPAGPSGPGPAGPPGP 190
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.5 bits (68), Expect = 0.88
Identities = 21/77 (27%), Positives = 22/77 (28%), Gaps = 2/77 (2%)
Frame = +3
Query: 657 GPPXPPYXGGXXGXPXTTXKXXAXXGPPX--PPXQPXXXXXXXPXGXXXGXXPXPXXGTP 830
G P P G G P K + P PP QP P G P G P
Sbjct: 114 GKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNP 173
Query: 831 XQPRXXXXXTXXXPPXP 881
P PP P
Sbjct: 174 GSPAGPSGPGPAGPPGP 190
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.5 bits (68), Expect = 0.88
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 607 PPXPPPXXXXXXXXGPGAPXXPPTXGGXXXPP 702
PP PPP P P PP GG PP
Sbjct: 562 PPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPP 593
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 607 PPXPPPXXXXXXXXGPGAPXXPPTXGGXXXPP 702
PP PPP P P PP G PP
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPP 592
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 30.7 bits (66), Expect = 1.5
Identities = 29/108 (26%), Positives = 30/108 (27%), Gaps = 10/108 (9%)
Frame = +3
Query: 621 PPXXXXXXXXXXGPPXPPYXGGXXGXPXT-----TXKXXAXXGPPXPPXQPXXXXXXXPX 785
PP GPP PP G G T T GP PP P P
Sbjct: 146 PPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDATPGLPGPRGPPGPPGEAGQPGPQ 205
Query: 786 GXXXGXXPXPXXGTPXQPRXXXXXTXXXPPXP-----LXXXPXPPGXR 914
G G TP P PP P P PPG +
Sbjct: 206 G-DAGTPAQSEPLTPGAPGEAGDAGPAGPPGPPGAPGNDGPPGPPGPK 252
>AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen protein
45 protein.
Length = 327
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +3
Query: 657 GPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQPXXXXXXXPXG 788
GPP PP G G K A PP PP + P G
Sbjct: 225 GPPGPPGYPGRPGETGDHGKTIAGEAPPGPPGRQGEMGPQGPPG 268
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 30.7 bits (66), Expect = 1.5
Identities = 29/108 (26%), Positives = 30/108 (27%), Gaps = 10/108 (9%)
Frame = +3
Query: 621 PPXXXXXXXXXXGPPXPPYXGGXXGXPXT-----TXKXXAXXGPPXPPXQPXXXXXXXPX 785
PP GPP PP G G T T GP PP P P
Sbjct: 146 PPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDATPGLPGPRGPPGPPGEAGQPGPQ 205
Query: 786 GXXXGXXPXPXXGTPXQPRXXXXXTXXXPPXP-----LXXXPXPPGXR 914
G G TP P PP P P PPG +
Sbjct: 206 G-DAGTPAQSEPLTPGAPGEAGDAGPAGPPGPPGAPGNDGPPGPPGPK 252
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = +3
Query: 657 GPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQPXXXXXXXPXGXXXGXXPXPXXGTPXQ 836
G P PP G G P PP QP G G P G P Q
Sbjct: 252 GRPGPPGEPGTYKTEVGPAGRAGAPGRPGPPGQPGPAGPPGENGKGGGQGPSGLPGPPGQ 311
Query: 837 P 839
P
Sbjct: 312 P 312
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = +3
Query: 657 GPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQPXXXXXXXPXGXXXGXXPXPXXGTPXQ 836
G P PP G G P PP QP G G P G P Q
Sbjct: 233 GRPGPPGEPGTYKTEVGPAGRAGAPGRPGPPGQPGPAGPPGENGKGGGQGPSGLPGPPGQ 292
Query: 837 P 839
P
Sbjct: 293 P 293
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/75 (29%), Positives = 22/75 (29%)
Frame = +3
Query: 657 GPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQPXXXXXXXPXGXXXGXXPXPXXGTPXQ 836
GPP PP G G P G P P Q P G P G P Q
Sbjct: 167 GPPGPPGPAGDAGSPGQA----GAPGNPGRPGQSGQRSRGLP-GPSGRPGPQGPPGAPGQ 221
Query: 837 PRXXXXXTXXXPPXP 881
P PP P
Sbjct: 222 PGSGSTPGPAGPPGP 236
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 29.5 bits (63), Expect = 3.5
Identities = 23/76 (30%), Positives = 23/76 (30%), Gaps = 1/76 (1%)
Frame = +3
Query: 657 GPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQP-XXXXXXXPXGXXXGXXPXPXXGTPX 833
GPP P G G P T A GPP PP P P G P P
Sbjct: 181 GPPGAP---GGPGAPGNTPSGGA-AGPPGPPGPPGGPGNDGQPGGPGNPGAPGAVTEVPG 236
Query: 834 QPRXXXXXTXXXPPXP 881
Q PP P
Sbjct: 237 QQGPPGPPGPAGPPGP 252
>Z81030-5|CAB02709.1| 324|Caenorhabditis elegans Hypothetical
protein C01G10.7 protein.
Length = 324
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 140 SKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPY 277
S KM+ K + S ++ ++D VA+T + + + AAA+D PY
Sbjct: 34 SNQKMLDKVPMMQADSVVLELEDGVALTAKADARVRAAAALDKLPY 79
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/75 (28%), Positives = 22/75 (29%)
Frame = +3
Query: 657 GPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQPXXXXXXXPXGXXXGXXPXPXXGTPXQ 836
GPP PP G G P G P P + P G P G P Q
Sbjct: 169 GPPGPPGPAGSAGSPGQA----GAPGNPGSPGKSGQRGRGLP-GPSGAPGPQGPPGAPGQ 223
Query: 837 PRXXXXXTXXXPPXP 881
P PP P
Sbjct: 224 PGSGNAPGPAGPPGP 238
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 6/54 (11%)
Frame = +1
Query: 607 PPXPPPXXXXXXXXGPGAPXXPPTXG------GXXXPPKXXXXXXPXXXPXPXP 750
PP PPP PG P PP G PP P P P P
Sbjct: 299 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 352
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +3
Query: 657 GPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQPXXXXXXXPXG 788
GPP PP GG G A GP PP Q P G
Sbjct: 221 GPPGPPGPGGPPGDAGGAGSDGA-PGPQGPPGQDGTPGNAGPDG 263
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = +3
Query: 657 GPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQPXXXXXXXPXGXXXGXXPXPXXGTPXQ 836
GPP P G G P P PP QP P P P G P
Sbjct: 103 GPPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGP-PGPPGP 161
Query: 837 P 839
P
Sbjct: 162 P 162
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 6/54 (11%)
Frame = +1
Query: 607 PPXPPPXXXXXXXXGPGAPXXPPTXG------GXXXPPKXXXXXXPXXXPXPXP 750
PP PPP PG P PP G PP P P P P
Sbjct: 309 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 362
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = +3
Query: 657 GPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQPXXXXXXXPXGXXXGXXPXPXXGTPXQ 836
GPP P G G P P PP QP P P P G P
Sbjct: 103 GPPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPWKPCPQGPPGP-PGPPGP 161
Query: 837 P 839
P
Sbjct: 162 P 162
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/61 (26%), Positives = 18/61 (29%)
Frame = +3
Query: 657 GPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQPXXXXXXXPXGXXXGXXPXPXXGTPXQ 836
GP P G G P G P P +P P G G+P Q
Sbjct: 184 GPKGPKGPPGAPGAPEHQESQECPRGEPLIPGEPGPPGEAGPQGPPGSPGQPGADGSPGQ 243
Query: 837 P 839
P
Sbjct: 244 P 244
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = +3
Query: 657 GPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQPXXXXXXXPXGXXXGXXPXPXXGTPXQ 836
GPP P G G P P PP QP P P P G P
Sbjct: 103 GPPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGP-PGPPGP 161
Query: 837 P 839
P
Sbjct: 162 P 162
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 455 SDDDMGFGLFD 487
SDDDMGFGLFD
Sbjct: 302 SDDDMGFGLFD 312
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.7 bits (61), Expect = 6.2
Identities = 26/89 (29%), Positives = 28/89 (31%), Gaps = 7/89 (7%)
Frame = +3
Query: 663 PXPPYXGGXXGXPXTTXKXXAXXGP------PXPPXQPXXXXXXXPXGXXXGXXPXPXXG 824
P PP GG G P T K A P P +P P P P G
Sbjct: 119 PGPPGPGGRPGKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPPCQPCPAGPPGPPGP-DG 177
Query: 825 TPXQPRXXXXXTXXXPPXPLXXXP-XPPG 908
TP +P P P P PPG
Sbjct: 178 TPGEP--GGPGPAGSPAGPSGPGPAGPPG 204
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = +3
Query: 657 GPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQPXXXXXXXPXGXXXGXXPXPXXGTPXQ 836
GPP PP G G P G P P P P G P G P Q
Sbjct: 168 GPPGPPGPDGTPGEP----------GGPGPAGSPAGPSGPGPAGPPGPAGPPGNDGQPGQ 217
Query: 837 P 839
P
Sbjct: 218 P 218
>U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical
protein C37A2.7 protein.
Length = 107
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 455 SDDDMGFGLFD 487
SDDDMGFGLFD
Sbjct: 97 SDDDMGFGLFD 107
>U80836-5|AAB37892.2| 621|Caenorhabditis elegans Hypothetical
protein B0432.7 protein.
Length = 621
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 176 CVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 346
C ++ L + DDD +T + + +L+ V PG+ A G NV + IGS
Sbjct: 269 CTFNVLTIGDDDCMMTRQIAADLLRRLVVSESSTTPGVPTLASTGKNVLNYGFFIGS 325
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = +3
Query: 657 GPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQPXXXXXXXPXGXXXGXXPXPXXGTPXQ 836
G P P G G P A GPP PP P P G G P
Sbjct: 201 GAPGVPGEKGPTGEPGKVING-APPGPPGPPGPPGPQGPPGPPGKDGQPGKAGPPGLPGD 259
Query: 837 P 839
P
Sbjct: 260 P 260
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 701 GGXXXPPXVGGXXGAPGPXXXXXXXXGGGXGGXXXG 594
GG PP GG G PG GG GG G
Sbjct: 169 GGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPG 204
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 701 GGXXXPPXVGGXXGAPGPXXXXXXXXGGGXGGXXXG 594
GG PP GG G PG GG GG G
Sbjct: 449 GGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPG 484
>AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical
protein Y62E10A.1 protein.
Length = 110
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 455 SDDDMGFGLFD 487
SDDDMGFGLFD
Sbjct: 100 SDDDMGFGLFD 110
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 28.7 bits (61), Expect = 6.2
Identities = 22/61 (36%), Positives = 24/61 (39%)
Frame = +3
Query: 657 GPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQPXXXXXXXPXGXXXGXXPXPXXGTPXQ 836
GPP PP G G P K A GPP P +P P G G P G P +
Sbjct: 161 GPPGPPGPEGPNGEPGN--KGPA--GPPGPGGKP---GPAGPPG-ENGNNGEPQPGAPGE 212
Query: 837 P 839
P
Sbjct: 213 P 213
>AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen protein
115 protein.
Length = 393
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = +3
Query: 657 GPPXPPYXGGXXGXPXT--TXKXXAXXGPPXPP 749
GPP PP G G P + K GPP PP
Sbjct: 279 GPPGPPGPPGLHGSPGSYGESKEEEIAGPPGPP 311
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 6/53 (11%)
Frame = +3
Query: 618 PPPXXXXXXXXXXGPPXPPYXG------GXXGXPXTTXKXXAXXGPPXPPXQP 758
PPP PP PP G G P A GPP PP P
Sbjct: 506 PPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPPLP 558
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 607 PPXPPPXXXXXXXXGPGAPXXPP 675
PP PPP G GAP PP
Sbjct: 631 PPPPPPPPMGLPAVGAGAPPPPP 653
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 607 PPXPPPXXXXXXXXGPGAPXXPP 675
PP PPP G GAP PP
Sbjct: 457 PPPPPPPPMGLPAVGAGAPPPPP 479
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.3 bits (60), Expect = 8.2
Identities = 27/97 (27%), Positives = 27/97 (27%)
Frame = +3
Query: 618 PPPXXXXXXXXXXGPPXPPYXGGXXGXPXTTXKXXAXXGPPXPPXQPXXXXXXXPXGXXX 797
P P GPP PP G G P G P P P G
Sbjct: 201 PGPDGDAGSPPPPGPPGPPGPPGNDGQP-------GAPGQDGQPGAPGTNTVNSPGGPGP 253
Query: 798 GXXPXPXXGTPXQPRXXXXXTXXXPPXPLXXXPXPPG 908
P P G P Q PP P P PPG
Sbjct: 254 AGPPGP-PGPPGQD-GSGGAAQPGPPGP----PGPPG 284
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,960,288
Number of Sequences: 27780
Number of extensions: 293845
Number of successful extensions: 1665
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1391
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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