Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_A16
         (878 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    27   0.30 
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    27   0.30 
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    27   0.30 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       25   0.92 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   4.9  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   8.6  

>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 26.6 bits (56), Expect = 0.30
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +2

Query: 215 FKDPSESKKKNMNTINFQTFVNSFQNRLEPPVRQHLKNV 331
           F+D  E    N NT+    F++ +   L+  +  H+K V
Sbjct: 61  FEDSDEGSNWNWNTLLRPNFLDGWYQTLQSAISAHMKKV 99


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 26.6 bits (56), Expect = 0.30
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +2

Query: 215 FKDPSESKKKNMNTINFQTFVNSFQNRLEPPVRQHLKNV 331
           F+D  E    N NT+    F++ +   L+  +  H+K V
Sbjct: 61  FEDSDEGSNWNWNTLLRPNFLDGWYQTLQSAISAHMKKV 99


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 26.6 bits (56), Expect = 0.30
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +2

Query: 215 FKDPSESKKKNMNTINFQTFVNSFQNRLEPPVRQHLKNV 331
           F+D  E    N NT+    F++ +   L+  +  H+K V
Sbjct: 61  FEDSDEGSNWNWNTLLRPNFLDGWYQTLQSAISAHMKKV 99


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 25.0 bits (52), Expect = 0.92
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = +2

Query: 770 SPXIPXXPXPPGXXFGPIPXPPPXXXGXPP 859
           SP  P    PP    GP P  PP   G PP
Sbjct: 30  SPQAPQRGSPPNPSQGPPPGGPP---GAPP 56


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -2

Query: 310 NWWFQSILKAVDKGLKI 260
           NW  Q ++K+++KG ++
Sbjct: 841 NWSNQDVIKSIEKGYRL 857


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 608 WVFVCFSGWLLCLLNQA 658
           WV V F  WL C+L  +
Sbjct: 331 WVKVVFLYWLPCILRMS 347


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,885
Number of Sequences: 438
Number of extensions: 4723
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)