Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_A15
         (867 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0881 - 25623679-25623843,25624104-25624195,25624287-256244...    31   1.6  
12_02_0736 + 22650641-22650689,22650827-22650975,22651783-226518...    30   2.1  
12_02_0272 - 16634765-16635004,16635412-16635457,16636107-166380...    29   6.4  
06_03_1024 - 26958473-26958661,26958750-26958815,26959234-269593...    28   8.4  

>06_03_0881 -
           25623679-25623843,25624104-25624195,25624287-25624446,
           25624586-25624668,25624845-25624913,25625480-25625555,
           25625645-25625895,25626387-25626537
          Length = 348

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
 Frame = +2

Query: 422 RIIRNEP*LLRRRLSMPHSLNCNINVKYEXDFKKNDLTFNYYIHNTTESYKRK---VVEE 592
           R ++ E  L+  R  +PHS   N   K       + L +N+Y+H+  ++ +RK   +V  
Sbjct: 159 RALKKETLLVSSRTVVPHSCP-NFREKMVEMRMLDGLLYNHYVHHNADTLRRKDWDMVSF 217

Query: 593 IEEMLAKYKLTDAYEELDXIIDLXXSKKCER 685
           I  + A  + ++A   +     +  S  C+R
Sbjct: 218 IRSLKAMVRASNAVAVITFPNTVLSSSFCKR 248


>12_02_0736 +
           22650641-22650689,22650827-22650975,22651783-22651839,
           22653534-22653611,22654688-22654953,22655249-22655351
          Length = 233

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -3

Query: 283 ISEIFCSCIHLCGLKMKPLCCDD*KLILAXGVDSQRRIIIKNK 155
           I E+F SC H   LK+ P+C D   + L   + S+     K K
Sbjct: 71  IHEVFLSCFHYRVLKVCPICYDAVGMDLVSHITSEHPSFFKGK 113


>12_02_0272 -
           16634765-16635004,16635412-16635457,16636107-16638098,
           16639478-16640286
          Length = 1028

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +2

Query: 548 IHNTTESYKRKVVEEIEEMLAKYKLTDAYEELDXIIDLXXSKKCEREGF 694
           +  T ESY  +++      L  Y+ ++A    D ++DL  S KC+ E F
Sbjct: 459 LEETAESYFNELINRSMIKLDDYRSSEACHVHDLMLDLIIS-KCQEENF 506


>06_03_1024 -
           26958473-26958661,26958750-26958815,26959234-26959303,
           26959526-26959773,26959938-26960029,26960726-26960871,
           26961001-26961185,26961721-26961838,26961948-26962087
          Length = 417

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +1

Query: 229 RVSFSNRIDEYTNKIFPKWSKEPGLLTEKGALLEGYMGEYL 351
           RV+F   +  Y    F  W K+PGL T +G L+E ++G+++
Sbjct: 120 RVTFKIVLS-YHGGSFDGWQKQPGLNTVQG-LVEKHLGQFV 158


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,027,121
Number of Sequences: 37544
Number of extensions: 382695
Number of successful extensions: 804
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)