Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_A14
(894 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.12
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.12
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.12
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.36
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.36
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.36
Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.84
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.84
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 31 1.5
Z81131-2|CAB03425.1| 349|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 3.4
AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical... 29 3.4
AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen pro... 29 4.5
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 29 5.9
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 29 5.9
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.12
Identities = 23/72 (31%), Positives = 23/72 (31%)
Frame = +2
Query: 608 PPLWNPPITXXXXEKCRKSX*DXPPAIXKTPRRXSPXRXPANMGGTXXIPPXAPKXPPXP 787
PP PPIT PP P P P GG PP PP P
Sbjct: 715 PPPGLPPITGGPPPPPPPGG--LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 788 TPXPPKQXTGSP 823
P PP G P
Sbjct: 773 PPPPPGGFKGGP 784
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.12
Identities = 23/72 (31%), Positives = 23/72 (31%)
Frame = +2
Query: 608 PPLWNPPITXXXXEKCRKSX*DXPPAIXKTPRRXSPXRXPANMGGTXXIPPXAPKXPPXP 787
PP PPIT PP P P P GG PP PP P
Sbjct: 715 PPPGLPPITGGPPPPPPPGG--LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 788 TPXPPKQXTGSP 823
P PP G P
Sbjct: 773 PPPPPGGFKGGP 784
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.12
Identities = 23/72 (31%), Positives = 23/72 (31%)
Frame = +2
Query: 608 PPLWNPPITXXXXEKCRKSX*DXPPAIXKTPRRXSPXRXPANMGGTXXIPPXAPKXPPXP 787
PP PPIT PP P P P GG PP PP P
Sbjct: 298 PPPGLPPITGGPPPPPPPGG--LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Query: 788 TPXPPKQXTGSP 823
P PP G P
Sbjct: 356 PPPPPGGFKGGP 367
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.7 bits (71), Expect = 0.36
Identities = 18/49 (36%), Positives = 19/49 (38%)
Frame = +2
Query: 677 PPAIXKTPRRXSPXRXPANMGGTXXIPPXAPKXPPXPTPXPPKQXTGSP 823
PPA P P G+ PP A PP T PP TGSP
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP 280
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/75 (29%), Positives = 24/75 (32%), Gaps = 4/75 (5%)
Frame = +2
Query: 677 PPAIXKTPRRXSPXRXPANMGGTXXIPPXAPKXPPXPTPXPPKQXTGS----PXARXXXP 844
PP P S P G+ PP PP PT PP G P A P
Sbjct: 241 PPPKGSPPLAGSGSPPPPPAAGSPP-PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 845 XHHQXXTPXTQXEPP 889
+P T PP
Sbjct: 300 PPPPRGSPPTGSLPP 314
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/80 (27%), Positives = 26/80 (32%), Gaps = 8/80 (10%)
Frame = +2
Query: 608 PPLWNPPITXXXXEKCRKSX*DXPPAIXKTPRRXSPXRXPANMGGTXXIPPXAPKXPPXP 787
PP +PP+ + PP +P P G PP A PP P
Sbjct: 242 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 301
Query: 788 TPX--------PPKQXTGSP 823
P PP Q GSP
Sbjct: 302 PPRGSPPTGSLPPPQAGGSP 321
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.7 bits (71), Expect = 0.36
Identities = 18/49 (36%), Positives = 19/49 (38%)
Frame = +2
Query: 677 PPAIXKTPRRXSPXRXPANMGGTXXIPPXAPKXPPXPTPXPPKQXTGSP 823
PPA P P G+ PP A PP T PP TGSP
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP 301
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/75 (29%), Positives = 24/75 (32%), Gaps = 4/75 (5%)
Frame = +2
Query: 677 PPAIXKTPRRXSPXRXPANMGGTXXIPPXAPKXPPXPTPXPPKQXTGS----PXARXXXP 844
PP P S P G+ PP PP PT PP G P A P
Sbjct: 262 PPPKGSPPLAGSGSPPPPPAAGSPP-PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 845 XHHQXXTPXTQXEPP 889
+P T PP
Sbjct: 321 PPPPRGSPPTGSLPP 335
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/80 (27%), Positives = 26/80 (32%), Gaps = 8/80 (10%)
Frame = +2
Query: 608 PPLWNPPITXXXXEKCRKSX*DXPPAIXKTPRRXSPXRXPANMGGTXXIPPXAPKXPPXP 787
PP +PP+ + PP +P P G PP A PP P
Sbjct: 263 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 322
Query: 788 TPX--------PPKQXTGSP 823
P PP Q GSP
Sbjct: 323 PPRGSPPTGSLPPPQAGGSP 342
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.7 bits (71), Expect = 0.36
Identities = 18/49 (36%), Positives = 19/49 (38%)
Frame = +2
Query: 677 PPAIXKTPRRXSPXRXPANMGGTXXIPPXAPKXPPXPTPXPPKQXTGSP 823
PPA P P G+ PP A PP T PP TGSP
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP 286
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/75 (29%), Positives = 24/75 (32%), Gaps = 4/75 (5%)
Frame = +2
Query: 677 PPAIXKTPRRXSPXRXPANMGGTXXIPPXAPKXPPXPTPXPPKQXTGS----PXARXXXP 844
PP P S P G+ PP PP PT PP G P A P
Sbjct: 247 PPPKGSPPLAGSGSPPPPPAAGSPP-PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 845 XHHQXXTPXTQXEPP 889
+P T PP
Sbjct: 306 PPPPRGSPPTGSLPP 320
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/80 (27%), Positives = 26/80 (32%), Gaps = 8/80 (10%)
Frame = +2
Query: 608 PPLWNPPITXXXXEKCRKSX*DXPPAIXKTPRRXSPXRXPANMGGTXXIPPXAPKXPPXP 787
PP +PP+ + PP +P P G PP A PP P
Sbjct: 248 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 307
Query: 788 TPX--------PPKQXTGSP 823
P PP Q GSP
Sbjct: 308 PPRGSPPTGSLPPPQAGGSP 327
>Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical
protein C17G1.4b protein.
Length = 844
Score = 31.5 bits (68), Expect = 0.84
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = +2
Query: 725 PANMGGTXXIPPXAPKXPPXPTPXPPKQXTGSPXARXXXPXHHQXXTPXTQXEPPE 892
PA++ GT P P+ P PP+ G+P R P Q +P E
Sbjct: 191 PAHLHGTPTYPGMPPQNAPLQHYQPPQYANGTPPVRGAGSSAFPPLQPSKQSKPDE 246
>Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical
protein C17G1.4a protein.
Length = 925
Score = 31.5 bits (68), Expect = 0.84
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = +2
Query: 725 PANMGGTXXIPPXAPKXPPXPTPXPPKQXTGSPXARXXXPXHHQXXTPXTQXEPPE 892
PA++ GT P P+ P PP+ G+P R P Q +P E
Sbjct: 191 PAHLHGTPTYPGMPPQNAPLQHYQPPQYANGTPPVRGAGSSAFPPLQPSKQSKPDE 246
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 0.84
Identities = 19/66 (28%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Frame = +2
Query: 677 PPAIXKTPRRXSPXRX-PANMGGTXXIPPXAPKXP-PXPTPXPPKQXTGSPXARXXXPXH 850
PP + P P R P MGG PP + P P P PP+ + P P
Sbjct: 310 PPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPS 369
Query: 851 HQXXTP 868
P
Sbjct: 370 RPPAPP 375
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 0.84
Identities = 19/66 (28%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Frame = +2
Query: 677 PPAIXKTPRRXSPXRX-PANMGGTXXIPPXAPKXP-PXPTPXPPKQXTGSPXARXXXPXH 850
PP + P P R P MGG PP + P P P PP+ + P P
Sbjct: 320 PPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPS 379
Query: 851 HQXXTP 868
P
Sbjct: 380 RPPAPP 385
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 677 PPAIXKTPRRXSPXRXPANMGGTXXIPPXAPKXPPXPTP-XPPKQXTGS 820
PP I + P + PA++ T +PP PP P P PP++ G+
Sbjct: 187 PPQINRYGSGPPPSK-PADLSNTRSLPPVNNPPPPHPIPQFPPEKQFGN 234
>Z81131-2|CAB03425.1| 349|Caenorhabditis elegans Hypothetical
protein T24D1.3 protein.
Length = 349
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 758 PXAPKXPPXPTPXPPKQXTGSPXA 829
P AP PP P P P +Q SP A
Sbjct: 64 PAAPNTPPVPVPPPVQQPQASPNA 87
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +2
Query: 677 PPA-IXKTPRRXSPXRXPANMGGTXXIPPXAPKXPPXPTPXPP 802
PPA + P SP P+ + PP AP P P P PP
Sbjct: 85 PPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPP 127
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = +2
Query: 677 PPAIXKTPRRXSPXRXPANMGGTXXI-PPXAPKXPPXPTPXPPKQXTGS 820
PP K P P + I P AP PP P P PP T S
Sbjct: 326 PPPPMKLDPSPQPAATPVEITEIPPIISPPAPPPPPPPPPPPPPPQTPS 374
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = -1
Query: 888 GGSXWVXGVXXWWCXGXXFRAXGDPVXCLGGXGVGXGGXLGAXGGIXXVPPMFAGCRXG 712
GG G C G G V GG G G GG G GG P GC G
Sbjct: 158 GGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGG-GGYAVAPSGGGGCGGG 215
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = -1
Query: 888 GGSXWVXGVXXWWCXGXXFRAXGDPVXCLGGXGVGXGGXLGAXGGIXXVPPMFAGCRXG 712
GG G C G G V GG G G GG G GG P GC G
Sbjct: 158 GGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGG-GGYAVAPSGGGGCGGG 215
>AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical
protein Y51H7C.13 protein.
Length = 344
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 758 PXAPKXPPXPTPXPPKQXTGSPXARXXXP 844
P + PP PT PP+ TGSP P
Sbjct: 282 PVPTENPPSPTNYPPEVTTGSPGGEVEIP 310
>AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen
protein 71 protein.
Length = 371
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Frame = +2
Query: 677 PPAIXKTPRRXSPX-RXPAN-MGGTXXIPPXAPKXPPXPTPXPP 802
PP P R P + AN + G PP AP P P P PP
Sbjct: 176 PPGPPGPPGRPGPNGKAGANGLNGNPGRPPEAPCEPVTPPPCPP 219
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Frame = +2
Query: 680 PAIXKTPRRXSPXRXPANMGGTXXIPPXAPKXPPXPTPXPPK-QXTGSPXARXXXP-XHH 853
P + + P + + P++ T P AP+ P PPK + +P A+ P
Sbjct: 375 PPVRQNPPMPAVQQAPSSQQATQAPPKPAPQQAPPVQQNPPKPTPSPAPPAQKAQPVTQQ 434
Query: 854 QXXTPXTQXEPP 889
Q P T P
Sbjct: 435 QASAPPTSPSAP 446
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/66 (30%), Positives = 25/66 (37%)
Frame = +2
Query: 605 APPLWNPPITXXXXEKCRKSX*DXPPAIXKTPRRXSPXRXPANMGGTXXIPPXAPKXPPX 784
APP PP + ++ PPA P +P PA + PP AP P
Sbjct: 176 APPPPRPP-PQEPPKPVEQAAPPPPPAPMPVPVEKAPEPVPAPV--EQIAPPPAPVQDPA 232
Query: 785 PTPXPP 802
P P P
Sbjct: 233 PAPVEP 238
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +2
Query: 698 PRRXSPXRXPANMGGTXXIPPXAPKXPPXPTPXPPKQXTGSPXARXXXP 844
P SP P+ G PP + P PTP PP + +P + P
Sbjct: 106 PPSFSPATQPSMNGHHAPPPPAVSRPPAFPTP-PPSVGSAAPSIQPPIP 153
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,968,654
Number of Sequences: 27780
Number of extensions: 289461
Number of successful extensions: 1562
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1381
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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