Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_A13
         (865 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr...    32   0.46 
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ...    28   9.9  

>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
           protein F29G6.1 protein.
          Length = 1170

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 437 VDGTETDLGRNGVCESRRSSCXYPELDEQXLP 532
           +DG+  D+  +G C +R+S+C     DE+ +P
Sbjct: 288 IDGSVIDIAHSGACRARKSTCITCPKDEKKIP 319


>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
           protein H11E01.3 protein.
          Length = 1464

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
 Frame = -3

Query: 524 LVHPVRDXSNYS--VEIHXHHYAQGQFQCHQHQHEDRVGDKHAVALPDGTAASEECNDES 351
           +VH V+  +  S  +++H  H  +  F  H    +  V   H      G    E+ +DE+
Sbjct: 498 VVHHVQTEAQQSPVIDVHSTHVVE-HFDTHDESPQSPVLSVHG-----GEEGYEDHHDEA 551

Query: 350 DAPNNHTGHRRYSE 309
              + HT H+ +SE
Sbjct: 552 PVLSVHTDHKAHSE 565


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,047,811
Number of Sequences: 27780
Number of extensions: 274155
Number of successful extensions: 668
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)