Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_A12
         (881 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68882-1|CAA93105.1|  487|Caenorhabditis elegans Hypothetical pr...   101   9e-22
Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z75531-6|CAA99807.1| 1144|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AC024796-11|AAK29890.2|  828|Caenorhabditis elegans Hypothetical...    29   5.8  
AC024753-1|AAF60456.1|  732|Caenorhabditis elegans Hypothetical ...    29   5.8  

>Z68882-1|CAA93105.1|  487|Caenorhabditis elegans Hypothetical
           protein C47E12.1 protein.
          Length = 487

 Score =  101 bits (241), Expect = 9e-22
 Identities = 55/120 (45%), Positives = 69/120 (57%)
 Frame = +3

Query: 246 LXDAVVEQDTLWRKLRHEADNFNKLKNVCSKEIGLKMKNKEPSGSEDEPVPSEIANNLVN 425
           L D V+E D  WRK R  AD  N+ KN  SK IG KMK KEP G++D  V  +I   L  
Sbjct: 32  LVDEVIELDEKWRKERFVADQLNRQKNAISKAIGEKMKKKEPQGTDDS-VADDIVARLAE 90

Query: 426 LTGDNLKPLTVNQIKKVRVLIDNAISKNDEGLLAAEKARSAALREVGNHLHESVPVDDDE 605
           L  D L  LTV Q+KK+RVL+D    +    ++A E AR   L ++GN +H SV V  DE
Sbjct: 91  LKIDELSQLTVVQLKKLRVLVDEKSVQTAAAVIANENARHEKLIQIGNLIHSSVVVSKDE 150



 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 20/34 (58%), Positives = 25/34 (73%)
 Frame = +1

Query: 610 HNLVERTDGDCGFXKKYSHVDLICMIDGMDGRQG 711
           +N +ERT GD    KKYSHVDL+ M+DG DG +G
Sbjct: 152 NNKIERTFGDLSTKKKYSHVDLVVMVDGFDGERG 185



 Score = 45.6 bits (103), Expect = 5e-05
 Identities = 19/32 (59%), Positives = 26/32 (81%)
 Frame = +2

Query: 152 MVLDLDLFRADKDGNPDKIRENQKKRFKDVAL 247
           MVLD+D+FR +K GNP+ IR++Q+ RFKD  L
Sbjct: 1   MVLDIDMFRTEKGGNPEIIRKSQQDRFKDPKL 32


>Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical protein
            ZC434.5 protein.
          Length = 1149

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 15/55 (27%), Positives = 32/55 (58%)
 Frame = +3

Query: 246  LXDAVVEQDTLWRKLRHEADNFNKLKNVCSKEIGLKMKNKEPSGSEDEPVPSEIA 410
            L   + +Q  L R+L+ +     + K+  +K + LK + K+ +GS+ +P P+++A
Sbjct: 1017 LSKQIDDQALLVRELKMKDAKSQETKDAIAKLLQLKKQYKDATGSDYKPAPAQLA 1071


>Z75531-6|CAA99807.1| 1144|Caenorhabditis elegans Hypothetical
           protein C54D10.7 protein.
          Length = 1144

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +3

Query: 33  FLSFGPAVPEKCETRDDVFDNFK 101
           FLS  P + + C+T  DVFDNFK
Sbjct: 3   FLSSLPLLGDACKTALDVFDNFK 25


>AC024796-11|AAK29890.2|  828|Caenorhabditis elegans Hypothetical
           protein Y48G1C.8 protein.
          Length = 828

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 393 VPSEIANNLVNLTGDNLKPLTVN 461
           VP+    N +N TGD L P TVN
Sbjct: 444 VPANFVANQINHTGDGLSPWTVN 466


>AC024753-1|AAF60456.1|  732|Caenorhabditis elegans Hypothetical
           protein Y23H5B.6 protein.
          Length = 732

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = +3

Query: 363 KEPSGSEDEPVPSEIANNLVNLTGDNLKPL--TVNQIKKVRVLIDNAISKNDEGLLAAEK 536
           K+P+G  ++    E A  + N+T    KPL   V ++   + +++  +  N +    AE 
Sbjct: 563 KKPTGEPEQIKEEEAAEKISNITISKTKPLKKAVTKVSAAKKILNKKLKVNTKKTFGAED 622

Query: 537 ARSAALRE 560
                L E
Sbjct: 623 DELEELEE 630


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,177,130
Number of Sequences: 27780
Number of extensions: 355137
Number of successful extensions: 1071
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)