Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_A07
(907 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.024
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.30
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 28 0.37
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.91
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.91
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 1.6
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 2.1
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 2.8
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 3.7
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 4.8
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 8.5
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 23 10.0
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.3 bits (75), Expect = 0.024
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +1
Query: 808 PPPPPPXXPXVFXXXXPAXXPPPTXTXXPPPPP 906
PPPPPP P PPP PPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP 764
Score = 34.3 bits (75), Expect = 0.024
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 805 PPPPPPPXXPXVFXXXXPAXXPPPTXTXXPPPPP 906
PPPPP P P P P PPPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 31.9 bits (69), Expect = 0.13
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 799 PXPPPPPPPXXPXVFXXXXPAXXPPPTXTXXPPPPP 906
P P P P P + P PP PPPPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 29.1 bits (62), Expect = 0.91
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = +1
Query: 793 GXPXPPPPPPPXXPXVFXXXXPAXXPPPTXTXXPPPPP 906
G P PPPPPP A PPP PPPPP
Sbjct: 759 GGPPPPPPPP--------GVAGAGPPPP-----PPPPP 783
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/47 (27%), Positives = 15/47 (31%)
Frame = -2
Query: 606 VVGGGXXPPXXXWXFGXFXXXPPXPPXGXGGXGGGVXGXXPXXPPXP 466
++GG PP G PP PP G P P P
Sbjct: 757 IMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.7 bits (66), Expect = 0.30
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +1
Query: 805 PPPPPPPXXPXVFXXXXPAXXPPPTXTXXPPPPP 906
PPPPPPP PP + PPPPP
Sbjct: 337 PPPPPPPRSNAA----GSIPLPPQGRSAPPPPPP 366
Score = 29.1 bits (62), Expect = 0.91
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = +1
Query: 793 GXPXPPPPPP--PXXPXVFXXXXPAXXPPPTXTXXPPPPP 906
G P PP PP P P + PA P P PPP P
Sbjct: 442 GAPAAPPLPPSAPIAPPL-PAGMPAAPPLPPAAPAPPPAP 480
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = +1
Query: 799 PXPPPPPPPXXPXVFXXXXPAXXP-PPTXTXXPPPP 903
P PP PP P PA P PP+ PP P
Sbjct: 425 PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +1
Query: 805 PPPPPPPXXPXVFXXXXPAXXPPPTXTXXPPPPP 906
PPPPPPP P + + PPPPP
Sbjct: 311 PPPPPPPSRRN---RGKPPIGNGSSNSSLPPPPP 341
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +1
Query: 805 PPPPPPPXXPXVFXXXXPAXXPPPTXTXXPPPPP 906
PP P PP P P PP P PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +1
Query: 793 GXPXPPPPPPPXXPXVFXXXXPAXXPPPTXTXXPPPP 903
G PPPPPP P P PPP
Sbjct: 357 GRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 505 PPXPPPPXRGXXGXXXKXTKXPXXXRGXPPPP 600
PP PPPP R G PPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/33 (33%), Positives = 12/33 (36%)
Frame = +1
Query: 808 PPPPPPXXPXVFXXXXPAXXPPPTXTXXPPPPP 906
PPPPPP P + P PPP
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 28.3 bits (60), Expect(2) = 0.37
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 793 GXPXPPPPPPP 825
G P PPPPPPP
Sbjct: 304 GLPPPPPPPPP 314
Score = 20.6 bits (41), Expect(2) = 0.37
Identities = 8/22 (36%), Positives = 9/22 (40%)
Frame = +1
Query: 811 PPPPPXXPXVFXXXXPAXXPPP 876
PPPPP P + P P
Sbjct: 306 PPPPPPPPPSNDFWKDSNEPAP 327
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.1 bits (62), Expect = 0.91
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 799 PXPPPPPPPXXPXVFXXXXPAXXPPPTXTXXPPPPP 906
P PPPPP P P+ P P PPPP
Sbjct: 1705 PTPPPPPMSVPPP------PSAPPMPAGPPSAPPPP 1734
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.1 bits (62), Expect = 0.91
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +1
Query: 793 GXPXPPPPPPPXXPXVFXXXXPAXXPPPTXTXXPPP 900
G P PPPPPP P P+ PPP PPP
Sbjct: 7 GNPPPPPPPPGFEP-------PSQPPPP-----PPP 30
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +1
Query: 799 PXPPPPPPPXXPXVFXXXXPAXXPPPTXTXXPPPP 903
P PPPPPP P PP+ PPPP
Sbjct: 6 PGNPPPPPP----------PPGFEPPSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 799 PXPPPPPPPXXPXVFXXXXPAXXPPP 876
P PPPPP P P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 1.6
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 799 PXPPPPPPPXXP 834
P PPPPPPP P
Sbjct: 236 PAPPPPPPPTLP 247
Score = 26.2 bits (55), Expect = 6.4
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 799 PXPPPPPPP 825
P PPPPPPP
Sbjct: 189 PPPPPPPPP 197
Score = 23.0 bits (47), Expect(2) = 2.7
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 799 PXPPPPPPP 825
P P PPPPP
Sbjct: 234 PLPAPPPPP 242
Score = 22.6 bits (46), Expect(2) = 2.7
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 805 PPPPPPPXXP 834
PPPPPP P
Sbjct: 239 PPPPPPTLPP 248
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = +1
Query: 793 GXPXPPPPPPPXXPXVFXXXXPAXXPP-PTXTXXPPPP 903
G P PPP P + P+ PP P + PP P
Sbjct: 1058 GAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVP 1095
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 805 PPPPPPPXXPXVFXXXXPAXXPPPTXTXXPPPPP 906
PP PPP P V PP T P P P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 26.2 bits (55), Expect = 6.4
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +1
Query: 805 PPPPPPPXXPXVFXXXXPAXXPP-PTXTXXPPPPP 906
PP PPP P V A PP P T PP P
Sbjct: 1208 PPVPPPSTAPPV--PTPSAGLPPVPVPTAKAPPVP 1240
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.5 bits (58), Expect = 2.8
Identities = 21/70 (30%), Positives = 23/70 (32%)
Frame = +2
Query: 452 GHXXXGXGGXXGXXPXTPPPXPPXPXGGXGGXXQKXPNXHXXXGGXXPPPTTXXXXXFXP 631
GH G GG G PP P GG GG + + H GG P
Sbjct: 184 GHNGGGFGGFGGGSGG--PPPGPGGFGGFGGFGGEG-HHHGGHGGFGGGPGGFEGGPGGF 240
Query: 632 SXNPXXXGGG 661
P GGG
Sbjct: 241 GGGPGGFGGG 250
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 484 GXXPXXPPPXPPPP 525
G P PPP PPPP
Sbjct: 939 GVMPAFPPPPPPPP 952
Score = 26.2 bits (55), Expect = 6.4
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 799 PXPPPPPPP 825
P PPPPPPP
Sbjct: 945 PPPPPPPPP 953
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -3
Query: 905 GGGGGXXVXVGGGXXAGXXXXKTXGXXGGGGGGGXG 798
GG GG GG G G GG GG G
Sbjct: 145 GGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRG 180
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +1
Query: 799 PXPPPPPPPXXPXVFXXXXPAXXPPPTXTXXPPPP 903
P PP P P P+ PPP+ PP P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPS-IPPPSPASAPPIP 161
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 22.6 bits (46), Expect(2) = 10.0
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +1
Query: 808 PPPPPPXXPXVFXXXXPAXXPPPTXTXXP 894
PPPPPP ++ P PT + P
Sbjct: 356 PPPPPPMPAPIY--NVPNVPTVPTVSPNP 382
Score = 21.0 bits (42), Expect(2) = 10.0
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 793 GXPXPPPPPPP 825
G PPPPP P
Sbjct: 353 GSRPPPPPPMP 363
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,651,465
Number of Sequences: 5004
Number of extensions: 20679
Number of successful extensions: 311
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -