Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_A02
         (1247 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.86 
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    27   1.5  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   2.6  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.5  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   3.5  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.5 bits (58), Expect = 0.86
 Identities = 14/30 (46%), Positives = 14/30 (46%)
 Frame = +1

Query: 229 PXXGGGGXGXXXXYXXXGGGXRGGXXXGGG 318
           P  GGGG G        GGG  GG   GGG
Sbjct: 200 PGAGGGGSGGGAP--GGGGGSSGGPGPGGG 227



 Score = 25.0 bits (52), Expect = 4.6
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +2

Query: 23  PGXGGAGXXXGXPXXEG*RAGXPKXG 100
           PG GG G   G P   G  +G P  G
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPG 225



 Score = 24.2 bits (50), Expect = 8.0
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +1

Query: 280 GGGXRGGXXXGGGRXXRGG 336
           GGG  GG   GGG    GG
Sbjct: 203 GGGGSGGGAPGGGGGSSGG 221



 Score = 24.2 bits (50), Expect = 8.0
 Identities = 11/30 (36%), Positives = 12/30 (40%)
 Frame = +1

Query: 229 PXXGGGGXGXXXXYXXXGGGXRGGXXXGGG 318
           P  GGGG G    +        GG   GGG
Sbjct: 224 PGGGGGGGGRDRDHRDRDREREGGGNGGGG 253


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 26.6 bits (56), Expect = 1.5
 Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
 Frame = +1

Query: 241 GGGXGXXXXYXXXGGGXRGGXXXGGGR-XXRGG 336
           GG  G    Y   G G RGG   G GR   RGG
Sbjct: 55  GGYGGGDDGYGGGGRGGRGGRGGGRGRGRGRGG 87


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.8 bits (54), Expect = 2.6
 Identities = 18/72 (25%), Positives = 19/72 (26%)
 Frame = +1

Query: 229 PXXGGGGXGXXXXYXXXGGGXRGGXXXGGGRXXRGGXXXXXXXXXXXXXXEXXXXQKKXX 408
           P   G G G        GGG  GG   GGG    G               E    +    
Sbjct: 545 PEYEGAGRGGVGSGIGGGGGGGGGGRAGGGVGATGAEKQQQNRSNHHRTTEQADREASVC 604

Query: 409 XAGGXXXRGXGG 444
            AGG       G
Sbjct: 605 AAGGVGAAAAAG 616



 Score = 25.4 bits (53), Expect = 3.5
 Identities = 12/33 (36%), Positives = 12/33 (36%)
 Frame = +1

Query: 238 GGGGXGXXXXYXXXGGGXRGGXXXGGGRXXRGG 336
           G GG G         GG  GG   GGG     G
Sbjct: 838 GAGGGGAGGPLRGSSGGAGGGSSGGGGSGGTSG 870


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 3.5
 Identities = 25/94 (26%), Positives = 25/94 (26%), Gaps = 4/94 (4%)
 Frame = -1

Query: 479 PXXXPXPAGXRLPPXPLXXXPPA---LXXFFXYXXLSXXXXXXXXXXXXXXPPRXXRPPP 309
           P   P P G  L   P    PP       FF                    PP    PPP
Sbjct: 530 PPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPP 589

Query: 308 XXXPPRXPPPXXMXXLXXP-XPPPPXXGXXGXXG 210
              PP  P P     L  P    PP     G  G
Sbjct: 590 PMGPP--PSPLAGGPLGGPAGSRPPLPNLLGFGG 621


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.4 bits (53), Expect = 3.5
 Identities = 12/30 (40%), Positives = 12/30 (40%)
 Frame = +1

Query: 229 PXXGGGGXGXXXXYXXXGGGXRGGXXXGGG 318
           P  GGGG G        G G  G    GGG
Sbjct: 650 PGSGGGGGGGGGGGGSVGSGGIGSSSLGGG 679


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.311    0.144    0.469 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 503,035
Number of Sequences: 2352
Number of extensions: 7313
Number of successful extensions: 71
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 142652703
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)