Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_P23
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373...    30   2.8  
11_04_0009 - 12132781-12133272                                         28   8.6  

>01_06_0823 + 32234588-32234936,32236354-32237093,32237260-32237343,
            32237909-32239263,32240399-32240460,32240544-32241144,
            32241229-32241310,32241778-32241840
          Length = 1111

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 832  TALPGGXAMQYAEKPPTPPXDXNI 761
            T  PGG A Q  ++PP PP   N+
Sbjct: 950  TQFPGGSAQQSEKRPPPPPPPPNV 973


>11_04_0009 - 12132781-12133272
          Length = 163

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 219 RSSTWAREQRWSCSKPAPERRRRIGSLR 136
           R   W RE+R S  +  P +RRR+G  R
Sbjct: 108 RGEAWRRERRDSKIESRPSQRRRVGGRR 135


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,696,836
Number of Sequences: 37544
Number of extensions: 314145
Number of successful extensions: 511
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)