Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_P22
         (907 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    24   1.7  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    24   2.2  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   6.7  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   6.7  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +3

Query: 9   STASLSGPSFIFASHSFGQATSPVALK---RRLDSHLILHLSIDKKLK 143
           +T +++G SF   S  FG A SP+        L SH + +++ ++ +K
Sbjct: 236 TTFTINGESFTLQSGIFGMALSPLTQNLYYSALSSHNLNYVNTEQFVK 283


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -2

Query: 231 AVKLPARHYRSGLR 190
           A+  P RHYRSGL+
Sbjct: 135 AIYHPLRHYRSGLK 148


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 166 CNFNAFLILSFLSML 122
           CNF A+ + SFL+ +
Sbjct: 143 CNFKAYCLFSFLNTI 157


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = +3

Query: 9   STASLSGPSFIFASHSFGQATSPVA---LKRRLDSHLILHLSIDKKLK 143
           S  +++G SF      FG A SPV        L SH + +++++  +K
Sbjct: 239 SELAVAGESFTVHDGIFGMALSPVTNNLYYSPLTSHSLYYVNMEPFMK 286


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 251,994
Number of Sequences: 438
Number of extensions: 5350
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)