Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_P17
(914 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 56 2e-06
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 55 2e-06
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 53 9e-06
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 51 4e-05
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 48 3e-04
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 38 0.36
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 38 0.36
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 36 1.1
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 34 5.8
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 55.6 bits (128), Expect = 2e-06
Identities = 44/112 (39%), Positives = 51/112 (45%)
Frame = +3
Query: 390 RGEAVCVLGALPLPRSLTRCXRSFGCGERYQLTQRR*YGYPQNQGIXQERXCEQKXSKRP 569
R +C G +PLPRSLTR RSFGCGERY+LT G E + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT--------DGDGNFLE-DTRKTLSKEE 76
Query: 570 GTVKRPRCWRFSIGSPP*RASQKSTLKSEVAXPDRTXKIPGVXPXKPPSXXL 725
RPR RFSIGS P + KS + + K P P PS L
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCAL 125
Score = 43.6 bits (98), Expect = 0.007
Identities = 21/40 (52%), Positives = 22/40 (55%)
Frame = +2
Query: 617 PLTXITKIDXQVRGGEXRQDYXDTRRXPLXTXLXXPLLXP 736
PLT I K D Q+ GGE RQDY D RR PL L P
Sbjct: 90 PLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLP 129
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.2 bits (127), Expect = 2e-06
Identities = 31/57 (54%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +3
Query: 366 CINESANXRGEAVCVLGALPLPRSLTRCXRSFGCGERYQL-TQRR*YGYPQNQGIXQ 533
CI + A R EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 53.2 bits (122), Expect = 9e-06
Identities = 26/40 (65%), Positives = 26/40 (65%)
Frame = +2
Query: 617 PLTXITKIDXQVRGGEXRQDYXDTRRXPLXTXLXXPLLXP 736
PLT ITKID QVRGGE RQDY DTRR PL L P
Sbjct: 22 PLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 51.2 bits (117), Expect = 4e-05
Identities = 24/32 (75%), Positives = 24/32 (75%)
Frame = -1
Query: 566 PFAXLLLTXSFLRYPLILWITVLPPLSELIPL 471
P LLT SF YPLILWITVLPPLSEL PL
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPL 50
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 48.0 bits (109), Expect = 3e-04
Identities = 23/40 (57%), Positives = 24/40 (60%)
Frame = +2
Query: 617 PLTXITKIDXQVRGGEXRQDYXDTRRXPLXTXLXXPLLXP 736
PLT ITK D Q+ GGE RQDY DTRR PL L P
Sbjct: 58 PLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 37.9 bits (84), Expect = 0.36
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +1
Query: 364 SALMNRPTPGERRFAYW 414
+ALMNRPT GERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 37.9 bits (84), Expect = 0.36
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = -2
Query: 436 ERGSGRAPNTQTASPRXLADSLMQ 365
+R + APNTQTASPR LADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 36.3 bits (80), Expect = 1.1
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +1
Query: 169 DPXMIXYIDEFGQTXTKMQ 225
DP MI YIDEFGQT T+MQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 33.9 bits (74), Expect = 5.8
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2
Query: 491 KAVIRLSTESGDXAGKXM 544
KAVIRLSTESGD AGK M
Sbjct: 42 KAVIRLSTESGDNAGKNM 59
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,666,189
Number of Sequences: 1657284
Number of extensions: 10688778
Number of successful extensions: 23202
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 20381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22960
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 83621356644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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