Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_P16
(898 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z68221-3|CAA92495.1| 1249|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z68221-2|CAD59229.1| 1228|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z68221-1|CAB61039.2| 1252|Caenorhabditis elegans Hypothetical pr... 29 4.5
AY438645-1|AAR00672.1| 1249|Caenorhabditis elegans membrane Calc... 29 4.5
AY438644-1|AAR00671.1| 1252|Caenorhabditis elegans membrane Calc... 29 4.5
AJ223616-1|CAA11491.1| 1228|Caenorhabditis elegans calcium ATPas... 29 4.5
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 29 6.0
Z68009-1|CAA92003.1| 1095|Caenorhabditis elegans Hypothetical pr... 28 7.9
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 28 7.9
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 4/38 (10%)
Frame = -3
Query: 458 GRGCYCGTS*PLPAT----PSCSPKPGMRVPVRLSPCP 357
G GC CG P PA+ P+C P V PCP
Sbjct: 31 GGGCCCGCGTPQPASCGCAPACPQAPSCPVCPPPQPCP 68
>Z68221-3|CAA92495.1| 1249|Caenorhabditis elegans Hypothetical protein
W09C2.3c protein.
Length = 1249
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 9/50 (18%)
Frame = -2
Query: 471 PLALRSWL---------LLWNKLTLACDAELLPEAGNAGPGQTQPVPVYV 349
PL L+ W+ L+W ++ ++ LP+A G G+ QP +++
Sbjct: 1057 PLTLQQWIVCLVLGFSTLIWGQIVATIPSKKLPKAWKVGKGEVQPANLHI 1106
>Z68221-2|CAD59229.1| 1228|Caenorhabditis elegans Hypothetical protein
W09C2.3b protein.
Length = 1228
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 9/50 (18%)
Frame = -2
Query: 471 PLALRSWL---------LLWNKLTLACDAELLPEAGNAGPGQTQPVPVYV 349
PL L+ W+ L+W ++ ++ LP+A G G+ QP +++
Sbjct: 1036 PLTLQQWIVCLVLGFSTLIWGQIVATIPSKKLPKAWKVGKGEVQPANLHI 1085
>Z68221-1|CAB61039.2| 1252|Caenorhabditis elegans Hypothetical protein
W09C2.3a protein.
Length = 1252
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 9/50 (18%)
Frame = -2
Query: 471 PLALRSWL---------LLWNKLTLACDAELLPEAGNAGPGQTQPVPVYV 349
PL L+ W+ L+W ++ ++ LP+A G G+ QP +++
Sbjct: 1060 PLTLQQWIVCLVLGFSTLIWGQIVATIPSKKLPKAWKVGKGEVQPANLHI 1109
>AY438645-1|AAR00672.1| 1249|Caenorhabditis elegans membrane Calcium
ATPase (136.9kD) (mca-1) protein.
Length = 1249
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 9/50 (18%)
Frame = -2
Query: 471 PLALRSWL---------LLWNKLTLACDAELLPEAGNAGPGQTQPVPVYV 349
PL L+ W+ L+W ++ ++ LP+A G G+ QP +++
Sbjct: 1057 PLTLQQWIVCLVLGFSTLIWGQIVATIPSKKLPKAWKVGKGEVQPANLHI 1106
>AY438644-1|AAR00671.1| 1252|Caenorhabditis elegans membrane Calcium
ATPase (136.6kD) (mca-1) protein.
Length = 1252
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 9/50 (18%)
Frame = -2
Query: 471 PLALRSWL---------LLWNKLTLACDAELLPEAGNAGPGQTQPVPVYV 349
PL L+ W+ L+W ++ ++ LP+A G G+ QP +++
Sbjct: 1060 PLTLQQWIVCLVLGFSTLIWGQIVATIPSKKLPKAWKVGKGEVQPANLHI 1109
>AJ223616-1|CAA11491.1| 1228|Caenorhabditis elegans calcium ATPase
protein.
Length = 1228
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 9/50 (18%)
Frame = -2
Query: 471 PLALRSWL---------LLWNKLTLACDAELLPEAGNAGPGQTQPVPVYV 349
PL L+ W+ L+W ++ ++ LP+A G G+ QP +++
Sbjct: 1036 PLTLQQWIVCLVLGFSTLIWGQIVATIPSKKLPKAWKVGKGEVQPANLHI 1085
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = -3
Query: 401 PKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLSLPVRGTFRAAPEV 222
P P PV+ +P T S A PA+ A + + SA P + S + P T +A+ +
Sbjct: 402 PAPQQAPPVQQNPPKPTPSPAPPAQKAQPVTQQQASAPPTSPSAPVQAPNTPTQKASSQD 461
Query: 221 P 219
P
Sbjct: 462 P 462
>Z68009-1|CAA92003.1| 1095|Caenorhabditis elegans Hypothetical protein
R09A8.1 protein.
Length = 1095
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +3
Query: 552 VQQKVGASLSAAHSDVINRNDYSAGGKLNLFRSPSSSLXFNAGFKKFDTP 701
VQ +GA+L ++ S N NDY + + S S NA KF P
Sbjct: 886 VQVPIGAALHSSSSIAANVNDYRSKAPTRMIHSSKVS-TVNAAASKFAAP 934
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 519 FKHAGRRS-GLHVQQKVGASLSAAHSDVINRNDYSAGGKLNLFRSPSSSL 665
F G+++ G+H QQ+ +++ SDV D G +LF SP+S +
Sbjct: 249 FVRGGKKNNGVHKQQRRQSNIDEIPSDVGKLRDNRKGRHNSLFVSPTSGM 298
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,563,952
Number of Sequences: 27780
Number of extensions: 318122
Number of successful extensions: 864
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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