Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_P14
         (863 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0385 + 2915532-2916482                                           31   1.2  
12_02_0280 - 16729000-16729678,16729948-16730039,16730072-167307...    30   2.7  
11_06_0610 - 25449085-25453284                                         29   3.6  
04_01_0152 - 1757244-1757369,1758675-1758926,1759594-1759665,176...    29   4.8  
02_01_0692 + 5179778-5181847                                           29   6.3  
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866...    28   8.4  
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433...    28   8.4  
03_02_0909 - 12310460-12310759,12310882-12310989,12311099-123112...    28   8.4  

>11_01_0385 + 2915532-2916482
          Length = 316

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -3

Query: 417 FHPRPSYATPSPPTQKWYPMSPQP 346
           FHP P+ A P P   KW P+ P P
Sbjct: 206 FHPPPTPAWPHPGGNKWPPLPPFP 229


>12_02_0280 -
           16729000-16729678,16729948-16730039,16730072-16730772,
           16731033-16731144,16731961-16731970,16732954-16733663
          Length = 767

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = +2

Query: 122 YTSSHPRLIEKXHLSVDFPVCSRDCWGAVPSKDTRPLNKPVP 247
           YT   P+L EK  L+ DF  C + C GA+P   T  L+   P
Sbjct: 652 YTHRFPKL-EKFILACDFLPCLKFCIGAMPQLQTLKLDDRRP 692


>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 411 PRPSYATPSPPTQKWYPMSPQPKE 340
           P   Y  P PP+  W P SP+ K+
Sbjct: 504 PPAEYGAPPPPSSGWLPKSPERKK 527


>04_01_0152 -
           1757244-1757369,1758675-1758926,1759594-1759665,
           1760529-1760648,1761014-1761037
          Length = 197

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -2

Query: 499 RCLDSPISNQANADAQFIGWSSMNTYDVPPAAFVRHPIAAHA 374
           R ++  ISN+   D   +G   +N     PA+F  HPI + A
Sbjct: 5   RVIECHISNRCGRDGNGVGRGGLNRNGPAPASFRVHPIPSPA 46


>02_01_0692 + 5179778-5181847
          Length = 689

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 18/51 (35%), Positives = 29/51 (56%)
 Frame = -3

Query: 531 SFFVVANCSAEGVSTLQSPIRQMPMLNLLAGPA*IPMTFHPRPSYATPSPP 379
           ++F++AN + +G+ST Q+ I Q P+ +     A   +T   R   A PSPP
Sbjct: 145 TYFIIANLTYQGLSTCQALIAQNPLHDSRGLVAGDNLTVPLR--CACPSPP 193


>09_06_0277 -
           21983049-21983080,21983250-21984788,21986619-21986655,
           21987612-21987665,21987781-21987893,21988272-21988660,
           21988783-21988903,21989245-21989342,21989963-21990153
          Length = 857

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 429 IPMTFHPRPSYATPSPPTQKWYPMSPQ 349
           +P   +P P   TPSPP    YP  P+
Sbjct: 428 LPPVVYPSPPEVTPSPPEIAPYPSPPE 454


>07_03_0792 -
           21541301-21542143,21542426-21542661,21543177-21543373,
           21543459-21544173,21544250-21544892,21545970-21546139,
           21546442-21546943
          Length = 1101

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
 Frame = -3

Query: 486 LQSPIRQMPMLNLLAGPA*IPMTFHP-RPSYATPSPPTQKWYPMSPQP 346
           L  P  Q PM  L A P   P    P  P  A P PP +   P  P+P
Sbjct: 567 LSPPAPQAPMPPLKASPVPPPEPSPPPAPKAAPPPPPPKSTGPGPPRP 614


>03_02_0909 -
           12310460-12310759,12310882-12310989,12311099-12311272,
           12311370-12311490,12311569-12311651,12311754-12312420,
           12314073-12314440
          Length = 606

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = -2

Query: 493 LDSPISNQANADAQFIGWSSMNTYDVPPAAFVRHP 389
           LDSP+++   AD+ F+G+S      V PA F++ P
Sbjct: 573 LDSPVASPVAADSNFVGFSY-----VRPAPFLQRP 602


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,475,406
Number of Sequences: 37544
Number of extensions: 467466
Number of successful extensions: 1649
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1642
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)