Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_P13
         (892 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.8  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    25   4.1  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   5.4  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    24   5.4  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +3

Query: 567 KKNXPPXGGXGFXFGXPXXFPXKKTXGPGXXGGGRG 674
           K++ P  GG G   G P       + GPG  GGG G
Sbjct: 196 KEDEPGAGGGGSGGGAPGG-GGGSSGGPGPGGGGGG 230


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 11/32 (34%), Positives = 11/32 (34%), Gaps = 1/32 (3%)
 Frame = -1

Query: 421 PXFFXXXPXPPXFFFXXGXPXPPPX-GXXPPP 329
           P      P  P        P PPP  G  PPP
Sbjct: 89  PGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPP 120


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 20/65 (30%), Positives = 21/65 (32%)
 Frame = -2

Query: 732 FXGXPXFLGXPXXPPWXGXXPXPPPXXXGPGFFXGGXGXGPQXQTPXPXGXGGFFFPXXP 553
           F   P     P  PP     P P P   GP    GG   G +   P   G GG   P   
Sbjct: 573 FPNLPNAQPPPAPPPPPPMGPPPSPLAGGP---LGGPA-GSRPPLPNLLGFGGAAPPVTI 628

Query: 552 XPPPP 538
             P P
Sbjct: 629 LVPYP 633


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +3

Query: 645 GPGXXGGGRGXXPXKGGXXXSPKXGG 722
           G G  GGGRG    +GG       GG
Sbjct: 71  GRGGRGGGRGRGRGRGGRDGGGGFGG 96


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.145    0.466 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,658
Number of Sequences: 2352
Number of extensions: 10534
Number of successful extensions: 28
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)