Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_P10
         (879 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0759 - 20851828-20851932,20852190-20852285,20853231-208533...    31   1.6  
05_01_0499 - 4166891-4166942,4167191-4167510                           30   2.1  
04_03_0998 - 21555696-21556080,21556177-21556254,21556333-215564...    30   2.1  
03_01_0141 + 1116833-1117082,1117658-1118574,1119417-1119579,111...    29   4.9  
01_03_0308 - 14883728-14884120                                         29   6.5  
07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166           28   8.6  
07_01_0370 + 2749353-2749786,2749949-2750346,2750435-2750519,275...    28   8.6  

>08_02_0759 -
           20851828-20851932,20852190-20852285,20853231-20853314,
           20853411-20853481,20853568-20853655,20853745-20853936,
           20854044-20854931
          Length = 507

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2

Query: 398 GEQLGVAGKVNLFHNNNHDLSAKGVRDQELSQRHPQRA 511
           GE   V   + L   +  DL A   + QELS+ HPQ+A
Sbjct: 108 GESAPVGAPIALLAESEDDLQAALAKAQELSKAHPQQA 145


>05_01_0499 - 4166891-4166942,4167191-4167510
          Length = 123

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -1

Query: 468 PLALRSWLLLWNKLTLPATPSCSPKPGMRVPVRLSPCPFTLSRASP 331
           PLALR   LL N +     PS SP+   +   R  P P + + ASP
Sbjct: 9   PLALRGASLLGNAVAAAVVPSSSPEQQQQQQRRPRPPPGSKNGASP 54


>04_03_0998 - 21555696-21556080,21556177-21556254,21556333-21556424,
            21556524-21556620,21557113-21557141,21557620-21557781,
            21557981-21558061,21558156-21558314,21558394-21558510,
            21558598-21558666,21558753-21558831,21560884-21561050,
            21561109-21561229,21561522-21561649,21562293-21562361,
            21562408-21562539,21562619-21562991,21563274-21563398,
            21563500-21563655,21563785-21564198,21564634-21564691,
            21566522-21566648,21568047-21568305,21569005-21569104,
            21569231-21569317,21569454-21569692,21569914-21569999,
            21570409-21570532,21571111-21574332
          Length = 2444

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -2

Query: 413  RRAAPRSRECGSRSDSARARLRCLERAPAEAALSLWRSLKS 291
            R ++ R R+ G    SA  R++ LER  A +    WRSL++
Sbjct: 1401 RASSSRRRQLGRSLRSAACRIQGLERLQAPSIEKAWRSLRN 1441


>03_01_0141 +
           1116833-1117082,1117658-1118574,1119417-1119579,
           1119668-1120497,1120562-1120570
          Length = 722

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = -3

Query: 418 CDAELLPEAGNAGPGQTQPV 359
           C A LLPE GN G GQ+  V
Sbjct: 486 CSATLLPEEGNTGDGQSPKV 505


>01_03_0308 - 14883728-14884120
          Length = 130

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = -2

Query: 584 AALNDAPTFCLNM*STPPXQRV-EVGRVGDGAGRVPDRERPWRSGRGCYCGTS*PCLRR 411
           A+ +  PT   +M      +R  E+G  G  AGR P     WR  R C C +S P + R
Sbjct: 46  ASRSPFPTTSPSMIDEQTTERAPEIG--GAVAGRKPSLAELWRRHRRCSCNSSCPPIER 102


>07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166
          Length = 545

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 219 SVRVHCEAAGLSPRTCRHVST 157
           S+R+HC A  L+PR CR   T
Sbjct: 401 SLRLHCPAPLLAPRKCRETCT 421


>07_01_0370 +
           2749353-2749786,2749949-2750346,2750435-2750519,
           2751200-2751314,2751538-2751591
          Length = 361

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -1

Query: 276 AEHVLVVAGERDLQGGPGGSVRVHCEAAGLSP-RTCRH 166
           A  V++ AG R   GG GG V VH  AA  SP  T RH
Sbjct: 17  AASVVIAAGPR--YGGGGGGVHVHPWAAFPSPTATTRH 52


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,950,649
Number of Sequences: 37544
Number of extensions: 413130
Number of successful extensions: 1335
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1335
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)