Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_P03
         (862 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P04142 Cluster: Cecropin-B precursor; n=16; Obtectomera...    52   2e-05
UniRef50_P01507 Cluster: Cecropin-A precursor; n=17; Ditrysia|Re...    50   1e-04
UniRef50_A6BMG0 Cluster: Cecropin A; n=1; Plutella xylostella|Re...    35   3.0  
UniRef50_A0CNE9 Cluster: Chromosome undetermined scaffold_22, wh...    33   9.3  

>UniRef50_P04142 Cluster: Cecropin-B precursor; n=16;
           Obtectomera|Rep: Cecropin-B precursor - Bombyx mori
           (Silk moth)
          Length = 63

 Score = 51.6 bits (118), Expect = 2e-05
 Identities = 25/63 (39%), Positives = 32/63 (50%)
 Frame = +2

Query: 122 MNFVRIXXXXXXXXXXXXXXXXXPEPRWKLFRKLRKWDATFAMD*SKAGPAIAVIGQAKS 301
           MNF +I                 PEPRWK+F+K+ K          KAGPAI V+G AK+
Sbjct: 1   MNFAKILSFVFALVLALSMTSAAPEPRWKIFKKIEKMGRNIRDGIVKAGPAIEVLGSAKA 60

Query: 302 LGK 310
           +GK
Sbjct: 61  IGK 63


>UniRef50_P01507 Cluster: Cecropin-A precursor; n=17; Ditrysia|Rep:
           Cecropin-A precursor - Hyalophora cecropia (Cecropia
           moth)
          Length = 64

 Score = 49.6 bits (113), Expect = 1e-04
 Identities = 25/63 (39%), Positives = 31/63 (49%)
 Frame = +2

Query: 122 MNFVRIXXXXXXXXXXXXXXXXXPEPRWKLFRKLRKWDATFAMD*SKAGPAIAVIGQAKS 301
           MNF RI                 PEP+WKLF+K+ K          KAGPA+AV+GQA  
Sbjct: 1   MNFSRIFFFVFACLTALAMVNAAPEPKWKLFKKIEKVGQNIRDGIIKAGPAVAVVGQATQ 60

Query: 302 LGK 310
           + K
Sbjct: 61  IAK 63



 Score = 34.3 bits (75), Expect = 4.0
 Identities = 13/18 (72%), Positives = 18/18 (100%)
 Frame = +1

Query: 214 QKIEKVGRNVRDGLIKSG 267
           +KIEKVG+N+RDG+IK+G
Sbjct: 32  KKIEKVGQNIRDGIIKAG 49


>UniRef50_A6BMG0 Cluster: Cecropin A; n=1; Plutella xylostella|Rep:
           Cecropin A - Plutella xylostella (Diamondback moth)
          Length = 66

 Score = 34.7 bits (76), Expect = 3.0
 Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +2

Query: 197 PRWKLFRKLRKWDATFAMD*SKA-GPAIAVIGQAKSLGK*T 316
           PRWK F+KL K          +  GPA+AVIGQA S+ + T
Sbjct: 24  PRWKPFKKLEKVGRNIRNGIIRYNGPAVAVIGQATSIARPT 64


>UniRef50_A0CNE9 Cluster: Chromosome undetermined scaffold_22, whole
           genome shotgun sequence; n=3; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_22,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 472

 Score = 33.1 bits (72), Expect = 9.3
 Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = +3

Query: 414 HKAFLYLLCHIMLCGSSIILVI-FDHTTVIXFPQSDRVHILLYTYFKIMLAF 566
           +K F +++ + +LCGSS I+ + F+ +  + FP S+   I +  +F  +L F
Sbjct: 344 NKVFFFII-YFLLCGSSAIMALTFEFSCELCFPLSENTTIAMLGFFGNLLNF 394


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 574,376,427
Number of Sequences: 1657284
Number of extensions: 9115956
Number of successful extensions: 17827
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17823
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76243001646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)