Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_P02
         (893 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cycla...    31   1.5  
AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor typ...    31   1.5  
AF016687-3|AAC48090.1|  375|Caenorhabditis elegans Paralysed arr...    29   5.9  
AC024859-13|AAK29965.2|  338|Caenorhabditis elegans Hypothetical...    29   5.9  
AC006677-8|AAF39943.1|  278|Caenorhabditis elegans Dehydrogenase...    28   7.8  

>U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cyclase
           protein 8 protein.
          Length = 1206

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +2

Query: 275 LGQHDEGAVVEVPQHYKRRTRGRRQVSDIYSPGLV 379
           L   ++  V  V Q + R+T+ RRQ+ D+Y+ GLV
Sbjct: 803 LKNREKNRVRRVDQDWMRQTQTRRQLGDVYAFGLV 837


>AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor type
           guanyly cyclase protein.
          Length = 1152

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +2

Query: 275 LGQHDEGAVVEVPQHYKRRTRGRRQVSDIYSPGLV 379
           L   ++  V  V Q + R+T+ RRQ+ D+Y+ GLV
Sbjct: 749 LKNREKNRVRRVDQDWMRQTQTRRQLGDVYAFGLV 783


>AF016687-3|AAC48090.1|  375|Caenorhabditis elegans Paralysed arrest
           at two-fold protein6 protein.
          Length = 375

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = +3

Query: 267 MQHLDNMMKELSLKFPSIINEGRVEGDKYQISIHLAWLRTERHQRESEKWSAD 425
           +Q L   ++++ ++ P +      +  K QI +  A  R     RE EKWSAD
Sbjct: 133 IQKLLEKLEQIRIEVPEVSQSEEGQRQKLQIVVQTA-NRILGQPREQEKWSAD 184


>AC024859-13|AAK29965.2|  338|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.17 protein.
          Length = 338

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 326 RRTRGRRQVSDIYSPGLVTNRKTST*KRKME 418
           R  R  R +SD++SP +VT+ +T     +ME
Sbjct: 147 RFERNNRLISDLFSPSIVTDTRTVVPHHRME 177


>AC006677-8|AAF39943.1|  278|Caenorhabditis elegans Dehydrogenases,
           short chain protein15 protein.
          Length = 278

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/47 (25%), Positives = 27/47 (57%)
 Frame = +3

Query: 99  SPXVFVAELAGGGLGRATSTPMARHIGRITITXPSXPYVRESMLDTH 239
           S  V +   +  G+GR+T+  +A+   ++T+T  S   ++E++ + H
Sbjct: 5   SDKVAIITGSSSGIGRSTAVLLAQEGAKVTVTGRSSEKIQETVNEIH 51


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,131,640
Number of Sequences: 27780
Number of extensions: 310249
Number of successful extensions: 876
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)