Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_O23
         (958 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC117255-1|AAI17256.1| 1048|Homo sapiens Sin3A-associated protei...    31   8.2  
BC017453-1|AAH17453.2|  693|Homo sapiens SAP130 protein protein.       31   8.2  
AY220791-1|AAO63591.1| 1048|Homo sapiens SIN3A-associated protei...    31   8.2  
AK022823-1|BAB14261.1|  613|Homo sapiens protein ( Homo sapiens ...    31   8.2  
AC012306-2|AAY14878.1|  732|Homo sapiens unknown protein.              31   8.2  

>BC117255-1|AAI17256.1| 1048|Homo sapiens Sin3A-associated protein,
            130kDa protein.
          Length = 1048

 Score = 30.7 bits (66), Expect = 8.2
 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = +3

Query: 153  KETATNLLTTARYIVNPPKDY-NPNGNGYEPIDNGAYYVDRPQGP-TLLQAYPFPW 314
            K TA +LL  A    +PPK+Y +  G  Y P+        RP+ P TLL+ Y  PW
Sbjct: 860  KSTAKSLLVKAEKRKSPPKEYIDEEGVRYVPV--------RPRPPITLLRHYRNPW 907


>BC017453-1|AAH17453.2|  693|Homo sapiens SAP130 protein protein.
          Length = 693

 Score = 30.7 bits (66), Expect = 8.2
 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = +3

Query: 153 KETATNLLTTARYIVNPPKDY-NPNGNGYEPIDNGAYYVDRPQGP-TLLQAYPFPW 314
           K TA +LL  A    +PPK+Y +  G  Y P+        RP+ P TLL+ Y  PW
Sbjct: 505 KSTAKSLLVKAEKRKSPPKEYIDEEGVRYVPV--------RPRPPITLLRHYRNPW 552


>AY220791-1|AAO63591.1| 1048|Homo sapiens SIN3A-associated protein 130
            protein.
          Length = 1048

 Score = 30.7 bits (66), Expect = 8.2
 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = +3

Query: 153  KETATNLLTTARYIVNPPKDY-NPNGNGYEPIDNGAYYVDRPQGP-TLLQAYPFPW 314
            K TA +LL  A    +PPK+Y +  G  Y P+        RP+ P TLL+ Y  PW
Sbjct: 860  KSTAKSLLVKAEKRKSPPKEYIDEEGVRYVPV--------RPRPPITLLRHYRNPW 907


>AK022823-1|BAB14261.1|  613|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12761 fis, clone NT2RP2001378, weakly similar to
           MUCIN 2 PRECURSOR. ).
          Length = 613

 Score = 30.7 bits (66), Expect = 8.2
 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = +3

Query: 153 KETATNLLTTARYIVNPPKDY-NPNGNGYEPIDNGAYYVDRPQGP-TLLQAYPFPW 314
           K TA +LL  A    +PPK+Y +  G  Y P+        RP+ P TLL+ Y  PW
Sbjct: 425 KSTAKSLLVKAEKRKSPPKEYIDEEGVRYVPV--------RPRPPITLLRHYRNPW 472


>AC012306-2|AAY14878.1|  732|Homo sapiens unknown protein.
          Length = 732

 Score = 30.7 bits (66), Expect = 8.2
 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = +3

Query: 153 KETATNLLTTARYIVNPPKDY-NPNGNGYEPIDNGAYYVDRPQGP-TLLQAYPFPW 314
           K TA +LL  A    +PPK+Y +  G  Y P+        RP+ P TLL+ Y  PW
Sbjct: 544 KSTAKSLLVKAEKRKSPPKEYIDEEGVRYVPV--------RPRPPITLLRHYRNPW 591


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,002,831
Number of Sequences: 237096
Number of extensions: 1849032
Number of successful extensions: 3267
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3253
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12658656216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)