Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_O23
         (958 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical pr...    31   1.6  
Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical pr...    31   1.6  
AF040646-1|AAK31537.1|  530|Caenorhabditis elegans Collagen prot...    29   6.5  
Z50756-4|CAA90639.1|  482|Caenorhabditis elegans Hypothetical pr...    28   8.6  
Z50741-5|CAA90612.1|  482|Caenorhabditis elegans Hypothetical pr...    28   8.6  
AF025450-2|AAB70936.3|  350|Caenorhabditis elegans Hypothetical ...    28   8.6  

>Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/58 (31%), Positives = 18/58 (31%)
 Frame = -1

Query: 916 GGXXKXXSPXXXXXGGXGXXXXXXXGXGGXKKGKXAFSPGGXAXXFXXXXKPXPXPPP 743
           GG     S       G G       G GG   G  A S GG          P P PPP
Sbjct: 252 GGYSSGGSSGGGYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPP 309


>Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/58 (31%), Positives = 18/58 (31%)
 Frame = -1

Query: 916 GGXXKXXSPXXXXXGGXGXXXXXXXGXGGXKKGKXAFSPGGXAXXFXXXXKPXPXPPP 743
           GG     S       G G       G GG   G  A S GG          P P PPP
Sbjct: 252 GGYSSGGSSGGGYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPP 309


>AF040646-1|AAK31537.1|  530|Caenorhabditis elegans Collagen protein
           70 protein.
          Length = 530

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 17/48 (35%), Positives = 21/48 (43%)
 Frame = +1

Query: 181 PPXTSLILPKTTTLMETATNLSTTVHITWTVPKGRPYFKPTPFPGARG 324
           PP T+    +T     T T + TTV   WT     P  +PTP  G  G
Sbjct: 319 PPATATPATQTPRTYSTTTPIKTTVPQQWTTLPPGP--EPTPGQGPSG 364


>Z50756-4|CAA90639.1|  482|Caenorhabditis elegans Hypothetical
           protein T08D10.1 protein.
          Length = 482

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 202 LPKTTTLMETATNLSTTVHITWTVPKGRPYFKPTPFPGAR 321
           +P T    E A+ + T++    T PK  P  +P P PG R
Sbjct: 23  IPPTVFRFEKASKIGTSLD---TTPKELPIRRPVPLPGPR 59


>Z50741-5|CAA90612.1|  482|Caenorhabditis elegans Hypothetical
           protein T08D10.1 protein.
          Length = 482

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 202 LPKTTTLMETATNLSTTVHITWTVPKGRPYFKPTPFPGAR 321
           +P T    E A+ + T++    T PK  P  +P P PG R
Sbjct: 23  IPPTVFRFEKASKIGTSLD---TTPKELPIRRPVPLPGPR 59


>AF025450-2|AAB70936.3|  350|Caenorhabditis elegans Hypothetical
           protein C41H7.5 protein.
          Length = 350

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 136 QQSEDENHEEFHFYMITSYXQAENI 62
           Q+   ENHEE+H   + SY Q EN+
Sbjct: 218 QEENHENHEEYHVEEV-SYAQDENV 241


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,825,753
Number of Sequences: 27780
Number of extensions: 250011
Number of successful extensions: 578
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 574
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2486134266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)