Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_O22
         (893 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0394 + 3073903-3073954,3074052-3074161,3074234-3074368,307...    32   0.54 
10_08_0144 - 15176059-15176112,15176375-15176455,15176711-151767...    31   1.6  

>03_01_0394 +
           3073903-3073954,3074052-3074161,3074234-3074368,
           3074461-3074616,3074793-3074876,3075069-3075115,
           3075305-3075378,3075634-3075692,3076149-3076208,
           3076826-3076906,3077033-3077086
          Length = 303

 Score = 32.3 bits (70), Expect = 0.54
 Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = +3

Query: 333 SLALGKMFNG--TIPIVLDTLKQHYFIDRDGGMFRHIXXXXXXXXXXXXTDFPDMELLLH 506
           S  L  MF+G  T+P   DT     F+DRDG  FRH+            ++  + + LL 
Sbjct: 35  SSMLAAMFSGRHTLPRHPDT--GMVFVDRDGKHFRHVLNWLRDGAVPDMSE-SEYQQLLR 91

Query: 507 EAHYFEL 527
           EA Y++L
Sbjct: 92  EAEYYQL 98


>10_08_0144 -
           15176059-15176112,15176375-15176455,15176711-15176770,
           15177220-15177278,15177412-15177485,15177595-15177641,
           15177852-15177935,15178051-15178212,15178264-15178467,
           15178541-15178647,15178746-15178773
          Length = 319

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +3

Query: 402 FIDRDGGMFRHIXXXXXXXXXXXXTDFPDMELLLHEAHYFEL 527
           F+DRDG +FRH+             D  +   LL EA Y+ L
Sbjct: 51  FVDRDGELFRHVLNWLRDGAVPALAD-AEYRQLLREAEYYRL 91


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,143,779
Number of Sequences: 37544
Number of extensions: 378320
Number of successful extensions: 871
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)