Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_O22
         (893 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024831-10|AAK72074.2|  521|Caenorhabditis elegans Hypothetical...    30   1.9  
AL034393-3|CAA22319.1|  348|Caenorhabditis elegans Hypothetical ...    28   7.8  

>AC024831-10|AAK72074.2|  521|Caenorhabditis elegans Hypothetical
           protein Y55F3C.3a protein.
          Length = 521

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
 Frame = +2

Query: 206 MEKKPIP-GIPRVAATTKYNAP---VHIDVGGTIYTSSLETLTAY-PESRLGQDVQRNHS 370
           +E + IP   P    + + N P   + +++GG+ Y     ++  + P++ LG+ V+ NH 
Sbjct: 43  VESRMIPVDRPSHKGSIRDNTPDSILRLNIGGSSYRIRTRSIIKFGPKTLLGRFVRMNHE 102

Query: 371 HRTGYAE 391
           HR  +A+
Sbjct: 103 HRRQWAD 109


>AL034393-3|CAA22319.1|  348|Caenorhabditis elegans Hypothetical
           protein Y18D10A.3 protein.
          Length = 348

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -3

Query: 240 TLGMPGIGFFSIELPSGWD 184
           T+   GI  FSI++PSGWD
Sbjct: 261 TVRASGIHVFSIDVPSGWD 279


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,734,312
Number of Sequences: 27780
Number of extensions: 310165
Number of successful extensions: 736
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)