Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_O21
         (913 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1044 + 8231933-8231941,8232091-8232166,8232423-8232871           33   0.31 
11_06_0610 - 25449085-25453284                                         31   1.7  
02_05_1023 + 33580416-33580904                                         29   5.1  

>01_01_1044 + 8231933-8231941,8232091-8232166,8232423-8232871
          Length = 177

 Score = 33.1 bits (72), Expect = 0.31
 Identities = 17/45 (37%), Positives = 18/45 (40%)
 Frame = -2

Query: 414 CRKPDRLVCXGCH*RSLCCNQLFPRVHHXFVPKCPRPCLPPFVCP 280
           C  P      GCH R +C     P       P CP PC PP  CP
Sbjct: 113 CSTPCSFPPIGCHDRGICPPPCPPPCPLPCPPPCPLPCPPP--CP 155


>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 25/54 (46%), Positives = 30/54 (55%)
 Frame = -1

Query: 442  LXPPGPKTXVP*A*PVSLPRLSLKISLL*PAFPKSPSXFCPQVPKTLPPPICLS 281
            L PP  K+  P A PVSLP   +K SL  P  P +P    P V K+LPPP  +S
Sbjct: 1256 LSPPAVKSLPPPA-PVSLPPPPVK-SL--P--PPAPVSLPPPVVKSLPPPAPVS 1303


>02_05_1023 + 33580416-33580904
          Length = 162

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 516 RWQIWDESIRLRCVGSGXEXHFSAGGMVSKEFG 614
           RW++   +I + CVG     H   GG V +E G
Sbjct: 72  RWEVGSGAITVACVGRSAAVHRFGGGGVLREVG 104


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,984,508
Number of Sequences: 37544
Number of extensions: 369711
Number of successful extensions: 879
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)