Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_O15
(857 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical pr... 342 2e-94
AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical ... 36 0.037
U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in bl... 29 4.2
U64859-8|AAC69096.1| 378|Caenorhabditis elegans Prion-like-(q/n... 29 4.2
Z81589-11|CAI58924.1| 330|Caenorhabditis elegans Hypothetical p... 28 7.4
Z81555-8|CAB04512.2| 330|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical pr... 28 7.4
>Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical
protein B0250.1 protein.
Length = 260
Score = 342 bits (840), Expect = 2e-94
Identities = 152/228 (66%), Positives = 181/228 (79%)
Frame = +3
Query: 90 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLXYAERHGYIKGVVKDIIHDPGRGAPLAV 269
MGR IR QRKGAG +F SH K RKGA KLR L YAERHGYIKG+VKDIIHDPGRGAPLA+
Sbjct: 1 MGRRIRIQRKGAGGIFKSHNKHRKGASKLRPLDYAERHGYIKGLVKDIIHDPGRGAPLAI 60
Query: 270 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 449
+ FRDPYK+KT K +A EG++TGQF++CG KA +++GN++PVG +PEGT +CN+E K
Sbjct: 61 IAFRDPYKYKTVKTTVVAAEGMHTGQFIHCGAKAQIQIGNIVPVGTLPEGTTICNVENKS 120
Query: 450 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 629
GDRG +ARASGN+ATVI HNPD K+TR++LPSGAKKV+ S NR M+G+VAGGGR DKP+L
Sbjct: 121 GDRGVIARASGNYATVIAHNPDTKKTRIRLPSGAKKVVQSVNRAMIGLVAGGGRTDKPLL 180
Query: 630 KAGRAYHKYKVXRNCWPYVRGVAMNPGXASSRWWXHQHIGKXXLSREE 773
KAGR+YHKYK RN WP VRGVAMNP HQHIG R +
Sbjct: 181 KAGRSYHKYKAKRNSWPRVRGVAMNPVEHPHGGGNHQHIGHPSTVRRD 228
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +2
Query: 758 TVKRGTSAGRKVGLIAXXXTGRIXGGXXIQ 847
TV+R SAG+KVGLIA TGRI GG ++
Sbjct: 224 TVRRDASAGKKVGLIAARRTGRIRGGKPVK 253
>AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical
protein F56B3.8 protein.
Length = 321
Score = 35.9 bits (79), Expect = 0.037
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 384 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 542
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLP 211
>U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 9 protein.
Length = 378
Score = 29.1 bits (62), Expect = 4.2
Identities = 24/89 (26%), Positives = 30/89 (33%)
Frame = -3
Query: 696 QHHVHMASSYVXPCTCGMPFQLSK*VCQYVHLQQQYRPCLCCLMAEPSWLQTVALLLYA* 517
+ H A C+C Q CQ +QQQ C C A+P QTV +
Sbjct: 24 KRHCGCAQPQQSQCSCQQVQQTQSCSCQSAPVQQQAPSCSC---AQPQQTQTVQVQSTQC 80
Query: 516 HQDCVQSQWRSFQRHVPDDLYHPFSLQDC 430
C QS + Q P Q C
Sbjct: 81 APACQQSCRQQCQSAPAVSQCQPMCQQQC 109
>U64859-8|AAC69096.1| 378|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 57
protein.
Length = 378
Score = 29.1 bits (62), Expect = 4.2
Identities = 24/89 (26%), Positives = 30/89 (33%)
Frame = -3
Query: 696 QHHVHMASSYVXPCTCGMPFQLSK*VCQYVHLQQQYRPCLCCLMAEPSWLQTVALLLYA* 517
+ H A C+C Q CQ +QQQ C C A+P QTV +
Sbjct: 24 KRHCGCAQPQQSQCSCQQVQQTQSCSCQSAPVQQQAPSCSC---AQPQQTQTVQVQSTQC 80
Query: 516 HQDCVQSQWRSFQRHVPDDLYHPFSLQDC 430
C QS + Q P Q C
Sbjct: 81 APACQQSCRQQCQSAPAVSQCQPMCQQQC 109
>Z81589-11|CAI58924.1| 330|Caenorhabditis elegans Hypothetical
protein F58E10.6 protein.
Length = 330
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 201 HGYIKGVVKDIIHDPGRGAPLAVVHFR 281
HG + +V I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311
>Z81555-8|CAB04512.2| 330|Caenorhabditis elegans Hypothetical
protein F58E10.6 protein.
Length = 330
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 201 HGYIKGVVKDIIHDPGRGAPLAVVHFR 281
HG + +V I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311
>Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical
protein T24B8.1 protein.
Length = 134
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 498 IGHNPDAKRTRVKLPSGAKKVL 563
IGH D +RTR LP+G KKVL
Sbjct: 57 IGHGSD-RRTRFVLPNGYKKVL 77
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,617,144
Number of Sequences: 27780
Number of extensions: 439949
Number of successful extensions: 1046
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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