Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_O13
(888 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 347 2e-95
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 347 2e-95
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 347 2e-95
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 347 2e-95
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 347 2e-95
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 347 2e-95
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 347 2e-95
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 347 2e-95
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 347 2e-95
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 347 2e-95
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 347 2e-95
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 347 2e-95
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 346 7e-95
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 345 1e-94
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 237 3e-62
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 225 1e-58
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 175 2e-43
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 156 9e-38
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 133 7e-31
EF452236-1|ABO40479.1| 1866|Homo sapiens NOD4 protein. 31 5.6
BC063566-1|AAH63566.1| 837|Homo sapiens NLRC5 protein protein. 31 5.6
BC050527-1|AAH50527.1| 386|Homo sapiens NLRC5 protein protein. 31 5.6
AK090439-1|BAC03420.1| 1056|Homo sapiens FLJ00359 protein protein. 31 5.6
AK074133-1|BAB84959.1| 702|Homo sapiens FLJ00206 protein protein. 31 5.6
AK025362-1|BAB15120.1| 1097|Homo sapiens protein ( Homo sapiens ... 31 5.6
AF389420-1|AAO59377.1| 1866|Homo sapiens NOD27 protein. 31 5.6
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 347 bits (854), Expect = 2e-95
Identities = 168/196 (85%), Positives = 178/196 (90%)
Frame = +3
Query: 120 GFSRQXLNXFLTRXLAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 299
G + LN FLTR LAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 300 KRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGC 479
KRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GC
Sbjct: 75 KRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGC 134
Query: 480 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQ 659
EVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 135 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDP 194
Query: 660 QGKNGPKKPQPDHILV 707
GK GPKKP PDH+ +
Sbjct: 195 TGKIGPKKPLPDHVSI 210
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 347 bits (854), Expect = 2e-95
Identities = 168/196 (85%), Positives = 178/196 (90%)
Frame = +3
Query: 120 GFSRQXLNXFLTRXLAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 299
G + LN FLTR LAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 300 KRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGC 479
KRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GC
Sbjct: 75 KRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGC 134
Query: 480 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQ 659
EVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 135 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDP 194
Query: 660 QGKNGPKKPQPDHILV 707
GK GPKKP PDH+ +
Sbjct: 195 TGKIGPKKPLPDHVSI 210
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 347 bits (854), Expect = 2e-95
Identities = 168/196 (85%), Positives = 178/196 (90%)
Frame = +3
Query: 120 GFSRQXLNXFLTRXLAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 299
G + LN FLTR LAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 300 KRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGC 479
KRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GC
Sbjct: 75 KRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGC 134
Query: 480 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQ 659
EVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 135 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDP 194
Query: 660 QGKNGPKKPQPDHILV 707
GK GPKKP PDH+ +
Sbjct: 195 TGKIGPKKPLPDHVSI 210
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 347 bits (854), Expect = 2e-95
Identities = 168/196 (85%), Positives = 178/196 (90%)
Frame = +3
Query: 120 GFSRQXLNXFLTRXLAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 299
G + LN FLTR LAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 300 KRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGC 479
KRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GC
Sbjct: 75 KRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGC 134
Query: 480 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQ 659
EVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 135 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDP 194
Query: 660 QGKNGPKKPQPDHILV 707
GK GPKKP PDH+ +
Sbjct: 195 TGKIGPKKPLPDHVSI 210
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 347 bits (854), Expect = 2e-95
Identities = 168/196 (85%), Positives = 178/196 (90%)
Frame = +3
Query: 120 GFSRQXLNXFLTRXLAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 299
G + LN FLTR LAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 300 KRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGC 479
KRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GC
Sbjct: 75 KRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGC 134
Query: 480 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQ 659
EVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 135 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDP 194
Query: 660 QGKNGPKKPQPDHILV 707
GK GPKKP PDH+ +
Sbjct: 195 TGKIGPKKPLPDHVSI 210
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 347 bits (854), Expect = 2e-95
Identities = 168/196 (85%), Positives = 178/196 (90%)
Frame = +3
Query: 120 GFSRQXLNXFLTRXLAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 299
G + LN FLTR LAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 300 KRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGC 479
KRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GC
Sbjct: 75 KRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGC 134
Query: 480 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQ 659
EVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 135 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDP 194
Query: 660 QGKNGPKKPQPDHILV 707
GK GPKKP PDH+ +
Sbjct: 195 TGKIGPKKPLPDHVSI 210
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 347 bits (854), Expect = 2e-95
Identities = 168/196 (85%), Positives = 178/196 (90%)
Frame = +3
Query: 120 GFSRQXLNXFLTRXLAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 299
G + LN FLTR LAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 300 KRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGC 479
KRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GC
Sbjct: 75 KRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGC 134
Query: 480 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQ 659
EVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 135 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDP 194
Query: 660 QGKNGPKKPQPDHILV 707
GK GPKKP PDH+ +
Sbjct: 195 TGKIGPKKPLPDHVSI 210
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 347 bits (854), Expect = 2e-95
Identities = 168/196 (85%), Positives = 178/196 (90%)
Frame = +3
Query: 120 GFSRQXLNXFLTRXLAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 299
G + LN FLTR LAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 14 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 73
Query: 300 KRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGC 479
KRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GC
Sbjct: 74 KRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGC 133
Query: 480 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQ 659
EVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 134 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDP 193
Query: 660 QGKNGPKKPQPDHILV 707
GK GPKKP PDH+ +
Sbjct: 194 TGKIGPKKPLPDHVSI 209
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 347 bits (854), Expect = 2e-95
Identities = 168/196 (85%), Positives = 178/196 (90%)
Frame = +3
Query: 120 GFSRQXLNXFLTRXLAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 299
G + LN FLTR LAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 14 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 73
Query: 300 KRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGC 479
KRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GC
Sbjct: 74 KRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGC 133
Query: 480 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQ 659
EVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 134 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDP 193
Query: 660 QGKNGPKKPQPDHILV 707
GK GPKKP PDH+ +
Sbjct: 194 TGKIGPKKPLPDHVSI 209
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 347 bits (854), Expect = 2e-95
Identities = 168/196 (85%), Positives = 178/196 (90%)
Frame = +3
Query: 120 GFSRQXLNXFLTRXLAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 299
G + LN FLTR LAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 300 KRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGC 479
KRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GC
Sbjct: 75 KRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGC 134
Query: 480 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQ 659
EVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 135 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDP 194
Query: 660 QGKNGPKKPQPDHILV 707
GK GPKKP PDH+ +
Sbjct: 195 TGKIGPKKPLPDHVSI 210
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 347 bits (854), Expect = 2e-95
Identities = 168/196 (85%), Positives = 178/196 (90%)
Frame = +3
Query: 120 GFSRQXLNXFLTRXLAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 299
G + LN FLTR LAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 300 KRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGC 479
KRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GC
Sbjct: 75 KRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGC 134
Query: 480 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQ 659
EVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 135 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDP 194
Query: 660 QGKNGPKKPQPDHILV 707
GK GPKKP PDH+ +
Sbjct: 195 TGKIGPKKPLPDHVSI 210
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 347 bits (854), Expect = 2e-95
Identities = 168/196 (85%), Positives = 178/196 (90%)
Frame = +3
Query: 120 GFSRQXLNXFLTRXLAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 299
G + LN FLTR LAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 300 KRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGC 479
KRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GC
Sbjct: 75 KRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGC 134
Query: 480 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQ 659
EVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 135 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDP 194
Query: 660 QGKNGPKKPQPDHILV 707
GK GPKKP PDH+ +
Sbjct: 195 TGKIGPKKPLPDHVSI 210
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 346 bits (850), Expect = 7e-95
Identities = 167/196 (85%), Positives = 178/196 (90%)
Frame = +3
Query: 120 GFSRQXLNXFLTRXLAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 299
G + LN FLTR LAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 300 KRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGC 479
KRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GC
Sbjct: 75 KRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGC 134
Query: 480 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQ 659
EVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 135 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDP 194
Query: 660 QGKNGPKKPQPDHILV 707
GK GPKKP PDH+ +
Sbjct: 195 TGKIGPKKPLPDHVSI 210
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 345 bits (849), Expect = 1e-94
Identities = 167/196 (85%), Positives = 177/196 (90%)
Frame = +3
Query: 120 GFSRQXLNXFLTRXLAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 299
G + LN FLTR LAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 300 KRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGC 479
KRF PE SVELYAEKVATRGLCAIAQAE LRYKL+GGLAVRRACYGVLRFIMESGA+GC
Sbjct: 75 KRFGFPEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRACYGVLRFIMESGAKGC 134
Query: 480 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQ 659
EVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 135 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDP 194
Query: 660 QGKNGPKKPQPDHILV 707
GK GPKKP PDH+ +
Sbjct: 195 TGKIGPKKPLPDHVSI 210
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 237 bits (581), Expect = 3e-62
Identities = 112/125 (89%), Positives = 117/125 (93%)
Frame = +3
Query: 333 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 512
LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQ
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 513 RAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQP 692
RAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP P
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLP 120
Query: 693 DHILV 707
DH+ +
Sbjct: 121 DHVSI 125
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 225 bits (551), Expect = 1e-58
Identities = 110/127 (86%), Positives = 116/127 (91%)
Frame = +3
Query: 261 KGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYG 440
+GRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYG
Sbjct: 6 QGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 65
Query: 441 VLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGV 620
VLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGV
Sbjct: 66 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV 125
Query: 621 LGIKVKI 641
V +
Sbjct: 126 WDTSVHL 132
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 175 bits (426), Expect = 2e-43
Identities = 87/103 (84%), Positives = 93/103 (90%)
Frame = +3
Query: 120 GFSRQXLNXFLTRXLAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 299
G + LN FLTR LAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 300 KRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 428
KRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 75 KRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 156 bits (379), Expect = 9e-38
Identities = 72/84 (85%), Positives = 76/84 (90%)
Frame = +3
Query: 456 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 635
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 636 KIMLPWDQQGKNGPKKPQPDHILV 707
KIMLPWD GK GPKKP PDH+ +
Sbjct: 61 KIMLPWDPTGKIGPKKPLPDHVSI 84
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 133 bits (322), Expect = 7e-31
Identities = 66/81 (81%), Positives = 71/81 (87%)
Frame = +3
Query: 120 GFSRQXLNXFLTRXLAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 299
G + LN FLTR LAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 300 KRFNIPEQSVELYAEKVATRG 362
KRF PE SVELYAEKVATRG
Sbjct: 75 KRFGFPEGSVELYAEKVATRG 95
>EF452236-1|ABO40479.1| 1866|Homo sapiens NOD4 protein.
Length = 1866
Score = 31.1 bits (67), Expect = 5.6
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Frame = -2
Query: 266 SFLSEHTLCPGGHNN-DLRADGSDPHFHAGVAVLGQX----PSEEXIEXLP*KP-QXQQI 105
SF S+H L G + D+ A GS P F A LG P + P +P ++
Sbjct: 1068 SFESQHILLRGDKTSRDMWATGSLPDFPAAAKFLGFRQRCIPRSLCLSECPLEPPSLTRL 1127
Query: 104 CAALKXCSRP 75
CA LK C P
Sbjct: 1128 CATLKDCPGP 1137
>BC063566-1|AAH63566.1| 837|Homo sapiens NLRC5 protein protein.
Length = 837
Score = 31.1 bits (67), Expect = 5.6
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Frame = -2
Query: 266 SFLSEHTLCPGGHNN-DLRADGSDPHFHAGVAVLGQX----PSEEXIEXLP*KP-QXQQI 105
SF S+H L G + D+ A GS P F A LG P + P +P ++
Sbjct: 39 SFESQHILLRGDKTSRDMWATGSLPDFPAAAKFLGFRKRCIPRSLCLSECPLEPPSLTRL 98
Query: 104 CAALKXCSRP 75
CA LK C P
Sbjct: 99 CATLKDCPGP 108
>BC050527-1|AAH50527.1| 386|Homo sapiens NLRC5 protein protein.
Length = 386
Score = 31.1 bits (67), Expect = 5.6
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Frame = -2
Query: 266 SFLSEHTLCPGGHNN-DLRADGSDPHFHAGVAVLGQX----PSEEXIEXLP*KP-QXQQI 105
SF S+H L G + D+ A GS P F A LG P + P +P ++
Sbjct: 98 SFESQHILLRGDKTSRDMWATGSLPDFPAAAKFLGFRQRCIPRSLCLSECPLEPPSLTRL 157
Query: 104 CAALKXCSRP 75
CA LK C P
Sbjct: 158 CATLKDCPGP 167
>AK090439-1|BAC03420.1| 1056|Homo sapiens FLJ00359 protein protein.
Length = 1056
Score = 31.1 bits (67), Expect = 5.6
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Frame = -2
Query: 266 SFLSEHTLCPGGHNN-DLRADGSDPHFHAGVAVLGQX----PSEEXIEXLP*KP-QXQQI 105
SF S+H L G + D+ A GS P F A LG P + P +P ++
Sbjct: 795 SFESQHILLRGDKTSRDMWATGSLPDFPAAAKFLGFRQRCIPRSLCLSECPLEPPSLTRL 854
Query: 104 CAALKXCSRP 75
CA LK C P
Sbjct: 855 CATLKDCPGP 864
>AK074133-1|BAB84959.1| 702|Homo sapiens FLJ00206 protein protein.
Length = 702
Score = 31.1 bits (67), Expect = 5.6
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Frame = -2
Query: 266 SFLSEHTLCPGGHNN-DLRADGSDPHFHAGVAVLGQX----PSEEXIEXLP*KP-QXQQI 105
SF S+H L G + D+ A GS P F A LG P + P +P ++
Sbjct: 219 SFESQHILLRGDKTSRDMWATGSLPDFPAAAKFLGFRKRCIPRSLCLSECPLEPPSLTRL 278
Query: 104 CAALKXCSRP 75
CA LK C P
Sbjct: 279 CATLKDCPGP 288
>AK025362-1|BAB15120.1| 1097|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21709 fis, clone COL10077. ).
Length = 1097
Score = 31.1 bits (67), Expect = 5.6
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Frame = -2
Query: 266 SFLSEHTLCPGGHNN-DLRADGSDPHFHAGVAVLGQX----PSEEXIEXLP*KP-QXQQI 105
SF S+H L G + D+ A GS P F A LG P + P +P ++
Sbjct: 753 SFESQHILLRGDKTSRDMWATGSLPDFPAAAKFLGFRQRCIPRSLCLSECPLEPPSLTRL 812
Query: 104 CAALKXCSRP 75
CA LK C P
Sbjct: 813 CATLKDCPGP 822
>AF389420-1|AAO59377.1| 1866|Homo sapiens NOD27 protein.
Length = 1866
Score = 31.1 bits (67), Expect = 5.6
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Frame = -2
Query: 266 SFLSEHTLCPGGHNN-DLRADGSDPHFHAGVAVLGQX----PSEEXIEXLP*KP-QXQQI 105
SF S+H L G + D+ A GS P F A LG P + P +P ++
Sbjct: 1068 SFESQHILLRGDKTSRDMWATGSLPDFPAAAKFLGFRQRCIPRSLCLSECPLEPPSLTRL 1127
Query: 104 CAALKXCSRP 75
CA LK C P
Sbjct: 1128 CATLKDCPGP 1137
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,467,096
Number of Sequences: 237096
Number of extensions: 2260310
Number of successful extensions: 8863
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 8628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8862
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -