Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_O10
(882 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 288 4e-78
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 288 4e-78
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 288 4e-78
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 288 4e-78
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 288 4e-78
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 288 4e-78
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 288 4e-78
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 288 4e-78
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 288 4e-78
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 281 5e-76
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 264 8e-71
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 166 2e-41
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 131 7e-31
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 118 7e-27
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 118 7e-27
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 118 7e-27
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 112 4e-25
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 111 6e-25
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 83 2e-16
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 38 0.010
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 38 0.010
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 37 0.017
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 36 0.051
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 30 1.9
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 30 1.9
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 30 1.9
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 30 1.9
Z77658-2|CAB01156.1| 457|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z74026-1|CAD56284.1| 1093|Caenorhabditis elegans Hypothetical pr... 30 2.5
U42841-13|AAC48170.1| 682|Caenorhabditis elegans Hypothetical p... 30 2.5
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 30 2.5
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 29 3.3
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z49967-4|CAA90250.1| 287|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z81122-5|CAB03357.1| 579|Caenorhabditis elegans Hypothetical pr... 29 5.8
U50070-3|AAR85909.1| 188|Caenorhabditis elegans Forkhead transc... 29 5.8
U50070-2|AAR85908.1| 592|Caenorhabditis elegans Forkhead transc... 29 5.8
U50070-1|AAR85907.1| 778|Caenorhabditis elegans Forkhead transc... 29 5.8
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 29 5.8
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 29 5.8
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 29 5.8
AF040661-18|AAG24217.1| 336|Caenorhabditis elegans Serpentine r... 29 5.8
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 28 7.7
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 7.7
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 28 7.7
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 7.7
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 288 bits (706), Expect = 4e-78
Identities = 151/208 (72%), Positives = 156/208 (75%), Gaps = 1/208 (0%)
Frame = +2
Query: 257 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 436
P IVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY
Sbjct: 33 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 92
Query: 437 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGY 616
NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG
Sbjct: 93 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGV 152
Query: 617 RAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEXS-SPSRGYSFXTTAXREIV 793
+ H + P H L + + RGYSF TTA REIV
Sbjct: 153 VLD-SGDGVTHTVPIYEGYALP-HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 210
Query: 794 RDIKEXLCYVALDFXXENGXX*SXXSLK 877
RDIKE LCYVALDF E S SL+
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLE 238
Score = 87.8 bits (208), Expect = 9e-18
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +3
Query: 615 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 737
+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 152 VVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +1
Query: 184 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 288
LVVDNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 288 bits (706), Expect = 4e-78
Identities = 151/208 (72%), Positives = 156/208 (75%), Gaps = 1/208 (0%)
Frame = +2
Query: 257 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 436
P IVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY
Sbjct: 33 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 92
Query: 437 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGY 616
NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG
Sbjct: 93 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGI 152
Query: 617 RAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEXS-SPSRGYSFXTTAXREIV 793
+ H + P H L + + RGYSF TTA REIV
Sbjct: 153 VLD-SGDGVTHTVPIYEGYALP-HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 210
Query: 794 RDIKEXLCYVALDFXXENGXX*SXXSLK 877
RDIKE LCYVALDF E S SL+
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLE 238
Score = 88.2 bits (209), Expect = 7e-18
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +3
Query: 615 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 737
IVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 152 IVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +1
Query: 184 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 288
LVVDNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 288 bits (706), Expect = 4e-78
Identities = 151/208 (72%), Positives = 156/208 (75%), Gaps = 1/208 (0%)
Frame = +2
Query: 257 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 436
P IVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY
Sbjct: 33 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 92
Query: 437 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGY 616
NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG
Sbjct: 93 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGV 152
Query: 617 RAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEXS-SPSRGYSFXTTAXREIV 793
+ H + P H L + + RGYSF TTA REIV
Sbjct: 153 VLD-SGDGVTHTVPIYEGYALP-HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 210
Query: 794 RDIKEXLCYVALDFXXENGXX*SXXSLK 877
RDIKE LCYVALDF E S SL+
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLE 238
Score = 87.8 bits (208), Expect = 9e-18
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +3
Query: 615 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 737
+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 152 VVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +1
Query: 184 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 288
LVVDNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 288 bits (706), Expect = 4e-78
Identities = 151/208 (72%), Positives = 156/208 (75%), Gaps = 1/208 (0%)
Frame = +2
Query: 257 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 436
P IVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY
Sbjct: 33 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 92
Query: 437 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGY 616
NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG
Sbjct: 93 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGV 152
Query: 617 RAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEXS-SPSRGYSFXTTAXREIV 793
+ H + P H L + + RGYSF TTA REIV
Sbjct: 153 VLD-SGDGVTHTVPIYEGYALP-HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 210
Query: 794 RDIKEXLCYVALDFXXENGXX*SXXSLK 877
RDIKE LCYVALDF E S SL+
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLE 238
Score = 87.8 bits (208), Expect = 9e-18
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +3
Query: 615 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 737
+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 152 VVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +1
Query: 184 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 288
LVVDNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 288 bits (706), Expect = 4e-78
Identities = 151/208 (72%), Positives = 156/208 (75%), Gaps = 1/208 (0%)
Frame = +2
Query: 257 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 436
P IVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY
Sbjct: 33 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 92
Query: 437 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGY 616
NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG
Sbjct: 93 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGV 152
Query: 617 RAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEXS-SPSRGYSFXTTAXREIV 793
+ H + P H L + + RGYSF TTA REIV
Sbjct: 153 VLD-SGDGVTHTVPIYEGYALP-HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 210
Query: 794 RDIKEXLCYVALDFXXENGXX*SXXSLK 877
RDIKE LCYVALDF E S SL+
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLE 238
Score = 87.8 bits (208), Expect = 9e-18
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +3
Query: 615 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 737
+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 152 VVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +1
Query: 184 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 288
LVVDNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 288 bits (706), Expect = 4e-78
Identities = 151/208 (72%), Positives = 156/208 (75%), Gaps = 1/208 (0%)
Frame = +2
Query: 257 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 436
P IVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY
Sbjct: 33 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 92
Query: 437 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGY 616
NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG
Sbjct: 93 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGI 152
Query: 617 RAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEXS-SPSRGYSFXTTAXREIV 793
+ H + P H L + + RGYSF TTA REIV
Sbjct: 153 VLD-SGDGVTHTVPIYEGYALP-HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 210
Query: 794 RDIKEXLCYVALDFXXENGXX*SXXSLK 877
RDIKE LCYVALDF E S SL+
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLE 238
Score = 88.2 bits (209), Expect = 7e-18
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +3
Query: 615 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 737
IVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 152 IVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
Score = 59.3 bits (137), Expect = 4e-09
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = +1
Query: 184 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 288
L++DNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 9 LILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 288 bits (706), Expect = 4e-78
Identities = 151/208 (72%), Positives = 156/208 (75%), Gaps = 1/208 (0%)
Frame = +2
Query: 257 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 436
P IVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY
Sbjct: 33 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 92
Query: 437 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGY 616
NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG
Sbjct: 93 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGV 152
Query: 617 RAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEXS-SPSRGYSFXTTAXREIV 793
+ H + P H L + + RGYSF TTA REIV
Sbjct: 153 VLD-SGDGVTHTVPIYEGYALP-HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 210
Query: 794 RDIKEXLCYVALDFXXENGXX*SXXSLK 877
RDIKE LCYVALDF E S SL+
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLE 238
Score = 87.8 bits (208), Expect = 9e-18
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +3
Query: 615 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 737
+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 152 VVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +1
Query: 184 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 288
LVVDNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 288 bits (706), Expect = 4e-78
Identities = 151/208 (72%), Positives = 156/208 (75%), Gaps = 1/208 (0%)
Frame = +2
Query: 257 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 436
P IVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY
Sbjct: 19 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 78
Query: 437 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGY 616
NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG
Sbjct: 79 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGV 138
Query: 617 RAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEXS-SPSRGYSFXTTAXREIV 793
+ H + P H L + + RGYSF TTA REIV
Sbjct: 139 VLD-SGDGVTHTVPIYEGYALP-HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 196
Query: 794 RDIKEXLCYVALDFXXENGXX*SXXSLK 877
RDIKE LCYVALDF E S SL+
Sbjct: 197 RDIKEKLCYVALDFEQEMATAASSSSLE 224
Score = 87.8 bits (208), Expect = 9e-18
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +3
Query: 615 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 737
+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 138 VVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 178
Score = 37.9 bits (84), Expect = 0.010
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1
Query: 214 KAGFAGDDAPRAVFPSNRGKAPPSG 288
+AGFAGDDAPRAVFPS G+ G
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQG 29
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 288 bits (706), Expect = 4e-78
Identities = 151/208 (72%), Positives = 156/208 (75%), Gaps = 1/208 (0%)
Frame = +2
Query: 257 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 436
P IVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY
Sbjct: 33 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 92
Query: 437 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGY 616
NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG
Sbjct: 93 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGV 152
Query: 617 RAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEXS-SPSRGYSFXTTAXREIV 793
+ H + P H L + + RGYSF TTA REIV
Sbjct: 153 VLD-SGDGVTHTVPIYEGYALP-HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 210
Query: 794 RDIKEXLCYVALDFXXENGXX*SXXSLK 877
RDIKE LCYVALDF E S SL+
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLE 238
Score = 87.8 bits (208), Expect = 9e-18
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +3
Query: 615 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 737
+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 152 VVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +1
Query: 184 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 288
LVVDNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 281 bits (689), Expect = 5e-76
Identities = 146/208 (70%), Positives = 154/208 (74%), Gaps = 1/208 (0%)
Frame = +2
Query: 257 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 436
P IVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY
Sbjct: 32 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 91
Query: 437 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGY 616
NELR+APEEHPVLLTEAPLNPK+NREKMTQIMFETFNTPAMYV IQAVLSLYASGRTTG
Sbjct: 92 NELRIAPEEHPVLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGI 151
Query: 617 RAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEXS-SPSRGYSFXTTAXREIV 793
+ H + P H L + + RGY+F TTA REIV
Sbjct: 152 VLDTGDG-VTHTVPIYEGYALP-HAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIV 209
Query: 794 RDIKEXLCYVALDFXXENGXX*SXXSLK 877
RDIKE LCYVA DF E S SL+
Sbjct: 210 RDIKEKLCYVAHDFESELAAAASSSSLE 237
Score = 83.8 bits (198), Expect = 1e-16
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = +3
Query: 615 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 737
IVLD+GDGV+HTVPIYEGYALPHAI RLDLAGRDLTDY+MK
Sbjct: 151 IVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMK 191
Score = 61.7 bits (143), Expect = 7e-10
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = +1
Query: 169 KKLPRLVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 288
+++ LVVDNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 3 EEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 264 bits (646), Expect = 8e-71
Identities = 140/196 (71%), Positives = 145/196 (73%), Gaps = 1/196 (0%)
Frame = +2
Query: 293 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 472
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 473 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGYRAGLRRRCLPHR 652
LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG + H
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD-SGDGVTHT 119
Query: 653 AHLRRIRTPPRHPASGLSRSRPHRLPHEXS-SPSRGYSFXTTAXREIVRDIKEXLCYVAL 829
+ P H L + + RGYSF TTA REIVRDIKE LCYVAL
Sbjct: 120 VPIYEGYALP-HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 178
Query: 830 DFXXENGXX*SXXSLK 877
DF E S SL+
Sbjct: 179 DFEQEMATAASSSSLE 194
Score = 87.8 bits (208), Expect = 9e-18
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +3
Query: 615 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 737
+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 108 VVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 148
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 166 bits (403), Expect = 2e-41
Identities = 87/193 (45%), Positives = 118/193 (61%), Gaps = 4/193 (2%)
Frame = +2
Query: 266 VGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNE 442
VGRP++ VM G D ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++
Sbjct: 38 VGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQ 97
Query: 443 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGY-- 616
L++ PEEHPVLLT+APLNP NRE+ +I FETFN PA+Y+ +QAVLSLYA+GRTTG
Sbjct: 98 LKIFPEEHPVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVL 157
Query: 617 -RAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEXSSPSRGYSFXTTAXREIV 793
+P R +G + R+ GY F + EIV
Sbjct: 158 DSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRV----LLRREGYEFHRSNEFEIV 213
Query: 794 RDIKEXLCYVALD 832
R++KE CY+ALD
Sbjct: 214 REMKENACYLALD 226
Score = 65.3 bits (152), Expect = 5e-11
Identities = 27/39 (69%), Positives = 35/39 (89%)
Frame = +3
Query: 615 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 731
+VLDSGDGV+H VPI +G+A+ HAI R+DLAGRD+T+YL
Sbjct: 155 VVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYL 193
Score = 37.1 bits (82), Expect = 0.017
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +1
Query: 184 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGK 273
+V+DNGSG+ KAGFAG+ P+ F + G+
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGR 40
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 131 bits (316), Expect = 7e-31
Identities = 83/203 (40%), Positives = 114/203 (56%), Gaps = 7/203 (3%)
Frame = +2
Query: 257 PRIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHT 430
P +VGRP + VG + KD VG+E R +L + YP+++GIV NWDDM +W HT
Sbjct: 33 PSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHT 92
Query: 431 FYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 607
F E L + P+E +LLTE PLNP +NREKM Q+MFE + ++YVA+QAVL+LYA G
Sbjct: 93 FGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLL 152
Query: 608 TGYRA----GLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEXSSPSRGYSFXTT 775
TG G+ C + T R +G ++ + + RGY+F +
Sbjct: 153 TGVVVDSGDGVTHICPVYEGFALHHLT-RRLDIAGRDITK-YLI---KLLLQRGYNFNHS 207
Query: 776 AXREIVRDIKEXLCYVALDFXXE 844
A E VR +KE LCY+A D E
Sbjct: 208 ADFETVRQMKEKLCYIAYDVEQE 230
Score = 64.1 bits (149), Expect = 1e-10
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = +3
Query: 615 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 737
+V+DSGDGV+H P+YEG+AL H RLD+AGRD+T YL+K
Sbjct: 155 VVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIK 195
Score = 37.5 bits (83), Expect = 0.013
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 184 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGK 273
+VVDNG+G K G+AG + P +FPS G+
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGR 38
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 118 bits (283), Expect = 7e-27
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = +2
Query: 257 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 418
P IVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 33 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +1
Query: 184 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 288
LVVDNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 118 bits (283), Expect = 7e-27
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = +2
Query: 257 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 418
P IVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 33 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +1
Query: 184 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 288
LVVDNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 118 bits (283), Expect = 7e-27
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = +2
Query: 257 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 418
P IVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 33 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +1
Query: 184 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 288
LVVDNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 112 bits (269), Expect = 4e-25
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +2
Query: 257 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 409
P IVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 33 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +1
Query: 184 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 288
LVVDNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 111 bits (267), Expect = 6e-25
Identities = 53/104 (50%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Frame = +2
Query: 290 VMVGMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 466
V G+ D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Query: 467 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 598
LLTE PLN NRE +IMFE+FN P +Y+A+QAVL+L AS
Sbjct: 116 FFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTAS 159
Score = 47.6 bits (108), Expect = 1e-05
Identities = 17/39 (43%), Positives = 29/39 (74%)
Frame = +3
Query: 615 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 731
+V+DSGDGV+H +P+ +GY + I + +AGRD+T ++
Sbjct: 173 LVIDSGDGVTHCIPVADGYVIGSCIKHIPIAGRDITYFI 211
Score = 37.1 bits (82), Expect = 0.017
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 172 KLPRLVVDNGSGMCKAGFAGDDAPRAVFPS 261
+LP V+DNG+G K G+AG+ P+ + PS
Sbjct: 5 QLPACVIDNGTGYTKLGYAGNTEPQFIIPS 34
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 83.4 bits (197), Expect = 2e-16
Identities = 37/80 (46%), Positives = 53/80 (66%)
Frame = +2
Query: 374 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 553
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 554 AMYVAIQAVLSLYASGRTTG 613
A Y++ VLS +A GRT G
Sbjct: 154 AYYLSKNVVLSCFAQGRTHG 173
Score = 36.3 bits (80), Expect = 0.029
Identities = 13/39 (33%), Positives = 27/39 (69%)
Frame = +3
Query: 615 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 731
+++DSG + VP+++GYA+ HA+++ + G +T+ L
Sbjct: 174 LMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQL 212
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.9 bits (84), Expect = 0.010
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +2
Query: 308 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 481
+K +V E + +L Y PIE G V NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 482 EAPLNPKANREKMTQIMFETF 544
+ A + ++I+F+ F
Sbjct: 98 DNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.9 bits (84), Expect = 0.010
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +2
Query: 308 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 481
+K +V E + +L Y PIE G V NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 482 EAPLNPKANREKMTQIMFETF 544
+ A + ++I+F+ F
Sbjct: 98 DNNYLIPALPDVSSEILFDYF 118
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 37.1 bits (82), Expect = 0.017
Identities = 29/83 (34%), Positives = 33/83 (39%)
Frame = +1
Query: 256 PSNRGKAPPSGRDGRYGTEGLLCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLL 435
P G A P+G DG GT G + YP+P P G G D AS
Sbjct: 189 PGPSGPAGPAGNDGAAGTPG---PDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTA 245
Query: 436 Q*AACRPRGTPSPAH*GSPQPQG 504
A P G P PA G+P P G
Sbjct: 246 APGAAGPPGPPGPA--GAPGPDG 266
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 35.5 bits (78), Expect = 0.051
Identities = 29/83 (34%), Positives = 33/83 (39%)
Frame = +1
Query: 256 PSNRGKAPPSGRDGRYGTEGLLCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLL 435
P G A P+G DG GT G + YP+P P G G D AS
Sbjct: 190 PGPPGPAGPAGNDGAAGTPG---PDGPAGESTYPEPAGPGPAGPPGPAGPPGPDGASPTA 246
Query: 436 Q*AACRPRGTPSPAH*GSPQPQG 504
A P G P PA G+P P G
Sbjct: 247 APGAAGPPGPPGPA--GAPGPDG 267
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +2
Query: 611 GYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEXSSPSRGYS 763
G G+ RR R R+PPR + SR+R R P +S R S
Sbjct: 390 GGNGGMNRRSWSRSRSRSRSRSPPRRRSRSRSRTRDRRRPRRSNSRRRSRS 440
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 229 GDDAPRAVFPSNRGKAPPSGRDGRYGTEG 315
GD P FP +G++ PSG DG G EG
Sbjct: 151 GDSGPEG-FPGLQGQSGPSGEDGAPGQEG 178
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -2
Query: 359 SGYLFCSVPHLLHKSPSVPYRPSRPDGG-AFPRFEGNTARGASSPAKPALHIPEP 198
SGY + H SPS P PS P P + + S PA+PA +P P
Sbjct: 350 SGYPSPAPQEPAHPSPSYP-SPSYPSPSYPSPSYPSPSYPSPSYPAEPAYSVPPP 403
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -2
Query: 317 SPSVPYRPSRPDGGAFPRFEGNTARGASSPAKPALHIP 204
SP P +P +P GA P GN +GAS+P +P P
Sbjct: 112 SPGKPGKPGKP--GA-PGAPGNPGKGASAPCEPVTQPP 146
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -2
Query: 317 SPSVPYRPSRPDGGAFPRFEGNTARGASSPAKPALHIP 204
SP P +P +P GA P GN +GAS+P +P P
Sbjct: 112 SPGKPGKPGKP--GA-PGAPGNPGKGASAPCEPVTQPP 146
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -2
Query: 317 SPSVPYRPSRPDGGAFPRFEGNTARGASSPAKPALHIP 204
SP P +P +P GA P GN +GAS+P +P P
Sbjct: 112 SPGKPGKPGKP--GA-PGAPGNPGKGASAPCEPVTQPP 146
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -2
Query: 317 SPSVPYRPSRPDGGAFPRFEGNTARGASSPAKPALHIP 204
SP P +P +P GA P GN +GAS+P +P P
Sbjct: 112 SPGKPGKPGKP--GA-PGAPGNPGKGASAPCEPVTQPP 146
>Z77658-2|CAB01156.1| 457|Caenorhabditis elegans Hypothetical
protein F14D7.2 protein.
Length = 457
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 543 STRPPCTSPSKPCSRCTRPVVPPXIVLDS-GDGVSHTVPIYEGYALPHA 686
ST+PP T ++ RP +PP L+ D + P+ +G +LP+A
Sbjct: 109 STKPPVTCRTEFTELEARPAIPPLGNLEGLTDSPTPRTPVNQGPSLPYA 157
>Z74026-1|CAD56284.1| 1093|Caenorhabditis elegans Hypothetical
protein B0240.3 protein.
Length = 1093
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +3
Query: 648 TVPIYEGYALPHAILRLDLAGRDLTDYLMKXPHRAAXTRSLPPPXGKSFVTS 803
++ +YEGY L L + L +Y+ P +A + S+P P G+ F+ S
Sbjct: 216 SLQMYEGYHLLGYYLYTAITNTTLFNYVQ--PEKAISSMSIPGPFGEIFINS 265
>U42841-13|AAC48170.1| 682|Caenorhabditis elegans Hypothetical
protein T17H7.1 protein.
Length = 682
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 220 GFAGDDAPRAVFPSNRGKAPPSGRDGR 300
G D P+ FP RG P GRDGR
Sbjct: 460 GQGPDFGPQDDFPGRRGSGGPEGRDGR 486
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 220 GFAGDDAPRAVFPSNRGKAPPSGRDGR 300
G D P+ FP RG P GRDGR
Sbjct: 525 GQGPDFGPQDDFPGRRGSGGPEGRDGR 551
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 196 NGSGMCKAGFAGDDAPRAVFPSNRGKAPPSGRDGRYGT 309
+ +G+CK GF + P + P +RG A G +G G+
Sbjct: 6287 DSTGLCKHGFRTTEIPSRLHPVSRGHALVFGANGFIGS 6324
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 29.5 bits (63), Expect = 3.3
Identities = 37/108 (34%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Frame = +1
Query: 217 AGFAGDDAPRAVF--PSNRGKAPPSGRDGRYGTEGLLCR--R*GTEQKRYPDPQIPHRTR 384
AG AG D A + P G A P G DG+ G G + GT P P P
Sbjct: 185 AGAAGPDGEGAGYAEPGPAGPAGPPGPDGQPGAPGPDGQPGAGGTTSTNQPGPPGPAGPP 244
Query: 385 NRH*LG*HGEDLASYLLQ*AACRPRGTPSPAH*GSPQPQGQQREDDPD 528
G GED +Y A P GTP P P P G+ E PD
Sbjct: 245 GP--AGPAGED--AY----AQPSPAGTPGP-----PGPPGKDGEAGPD 279
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 625 TPATVSPTPCPSTKDTHSPTPSCVWT*PVATSQTTS 732
TP T + TP +T+ T +PT T P T+ TT+
Sbjct: 94 TPTTTTTTPTTTTETTTTPTTETTTT-PTTTTPTTT 128
>Z49967-4|CAA90250.1| 287|Caenorhabditis elegans Hypothetical
protein F54C9.4 protein.
Length = 287
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 214 KAGFAGDDAPRAVFPSNRGKAPPSGRDGRYGTEGL 318
+AG G+ P+ P G P+G+DG G GL
Sbjct: 180 EAGITGEQGPQGE-PGTEGSEGPTGQDGTIGGPGL 213
>Z81122-5|CAB03357.1| 579|Caenorhabditis elegans Hypothetical
protein T13F2.6 protein.
Length = 579
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 47 IPRSELGSLRCTAITKLCNSKLIYLFIIE 133
+P+ E+G L CT I C ++ I+ F IE
Sbjct: 156 LPKREIGRLLCTVIAVQCPTEKIWKFRIE 184
>U50070-3|AAR85909.1| 188|Caenorhabditis elegans Forkhead
transcription factor familyprotein 7, isoform c protein.
Length = 188
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 714 DLTDYLMKXPHRAAXTRSLPPPXGKSFVTSRKXCATXLLTSNXKMAXVDP 863
D +++ + P+RA+ TRS P ++ +K T L+S +M DP
Sbjct: 46 DDSEFYRRRPNRASATRSQPQTPLPDDISQQKLFDTSALSSFLEMQNFDP 95
>U50070-2|AAR85908.1| 592|Caenorhabditis elegans Forkhead
transcription factor familyprotein 7, isoform b protein.
Length = 592
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 714 DLTDYLMKXPHRAAXTRSLPPPXGKSFVTSRKXCATXLLTSNXKMAXVDP 863
D +++ + P+RA+ TRS P ++ +K T L+S +M DP
Sbjct: 450 DDSEFYRRRPNRASATRSQPQTPLPDDISQQKLFDTSALSSFLEMQNFDP 499
>U50070-1|AAR85907.1| 778|Caenorhabditis elegans Forkhead
transcription factor familyprotein 7, isoform a protein.
Length = 778
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 714 DLTDYLMKXPHRAAXTRSLPPPXGKSFVTSRKXCATXLLTSNXKMAXVDP 863
D +++ + P+RA+ TRS P ++ +K T L+S +M DP
Sbjct: 636 DDSEFYRRRPNRASATRSQPQTPLPDDISQQKLFDTSALSSFLEMQNFDP 685
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 593 ASGRTTGY-RAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEXSSPSR 754
A G+ G R G R R+ RR RTPPR + R R R SS SR
Sbjct: 72 ARGKPRGNDRHGSRSPRRRSRSPRRRSRTPPRRRSRSRDRKRSRRSRSRSSSRSR 126
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 593 ASGRTTGY-RAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEXSSPSR 754
A G+ G R G R R+ RR RTPPR + R R R SS SR
Sbjct: 72 ARGKPRGNDRHGSRSPRRRSRSPRRRSRTPPRRRSRSRDRKRSRRSRSRSSSRSR 126
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 593 ASGRTTGY-RAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEXSSPSR 754
A G+ G R G R R+ RR RTPPR + R R R SS SR
Sbjct: 72 ARGKPRGNDRHGSRSPRRRSRSPRRRSRTPPRRRSRSRDRKRSRRSRSRSSSRSR 126
>AF040661-18|AAG24217.1| 336|Caenorhabditis elegans Serpentine
receptor, class h protein60 protein.
Length = 336
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +1
Query: 145 KTNSRCATKKLPRLVVDNGSGMCKAGFAGDDAPRAVFPSNRGKA 276
KT SR T K+P L+ S F AP A FP+ GK+
Sbjct: 49 KTPSRMKTMKVPLLISHASSTNLDLMFTVYSAPYAFFPTASGKS 92
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 445 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 570
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1274
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 445 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 570
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 445 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 570
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1275
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 445 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 570
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,607,984
Number of Sequences: 27780
Number of extensions: 482328
Number of successful extensions: 2046
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2038
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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