Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_O05
         (897 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0645 - 23899579-23904483                                         30   2.2  
08_02_1187 - 25036023-25038443,25038636-25039939,25040033-25040135     29   6.6  
03_05_0243 - 22275425-22276402,22277192-22277307,22277434-22279012     29   6.6  
05_05_0189 + 23106165-23106341,23106606-23107598,23107694-23109013     28   8.8  
02_05_0003 - 24867053-24867145,24867264-24867437,24867673-248677...    28   8.8  

>01_05_0645 - 23899579-23904483
          Length = 1634

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = +3

Query: 276 KKRIPEALRTKCAKCNPKQRHLIRTVVKAFQTKLPDLWEELAIKEDPKGQYKHEFTAFIN 455
           K   P+ L T   + NP  RH I   +K  +  LP+ W  L+   +PK   + E  + I 
Sbjct: 9   KHYTPKGLTT-LLQTNPNNRHTIPKTLKWDEITLPEKW-VLSQAVEPKSMDQSEVESLIE 66

Query: 456 AMD 464
            +D
Sbjct: 67  TLD 69


>08_02_1187 - 25036023-25038443,25038636-25039939,25040033-25040135
          Length = 1275

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 19/63 (30%), Positives = 28/63 (44%)
 Frame = +3

Query: 276 KKRIPEALRTKCAKCNPKQRHLIRTVVKAFQTKLPDLWEELAIKEDPKGQYKHEFTAFIN 455
           K   P+ L T   + NP  RH I   +K  +  LP+ W  L+   +PK   + E  + I 
Sbjct: 158 KHYTPKGLTT-LLQTNPNNRHTIPKTLKWDEITLPEKW-VLSQAVEPKSMDQSEVESLIE 215

Query: 456 AMD 464
             D
Sbjct: 216 TPD 218


>03_05_0243 - 22275425-22276402,22277192-22277307,22277434-22279012
          Length = 890

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 19/63 (30%), Positives = 28/63 (44%)
 Frame = +3

Query: 276 KKRIPEALRTKCAKCNPKQRHLIRTVVKAFQTKLPDLWEELAIKEDPKGQYKHEFTAFIN 455
           K   P+ L T   + NP  RH I   +K  +  LP+ W  L+   +PK   + E  + I 
Sbjct: 9   KHYTPKGLTT-LLQTNPNNRHTIPKTLKWDEITLPEKW-VLSQAVEPKSMDQSEVESLIE 66

Query: 456 AMD 464
             D
Sbjct: 67  TPD 69


>05_05_0189 + 23106165-23106341,23106606-23107598,23107694-23109013
          Length = 829

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -1

Query: 420 PWGPPLWQALPTG-QAV*SGKPLPLYGSDDAVSGCIWRI 307
           P GPPL  AL    +A+ SG  LPLY +   +S  +WR+
Sbjct: 293 PDGPPLGTALGEKIEAMVSGLILPLYYAMTGLSTDVWRM 331


>02_05_0003 -
           24867053-24867145,24867264-24867437,24867673-24867735,
           24868108-24868198,24869579-24869673,24870471-24870668,
           24871475-24871648,24872335-24872439,24872645-24872737,
           24873688-24873690,24874776-24874844,24875208-24875265,
           24875810-24875918,24876603-24876714,24877992-24878204,
           24878214-24878546
          Length = 660

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -2

Query: 221 SSSRGASCPPAARRQNYHIDCCSILPVGKQRP 126
           ++SR A   PAAR    H+ CCS       +P
Sbjct: 17  AASRAAKAAPAARPLRPHVRCCSPAAASTTKP 48


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,162,221
Number of Sequences: 37544
Number of extensions: 348067
Number of successful extensions: 814
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)