Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_O05
         (897 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14391-1|AAA62667.1| 1109|Homo sapiens myosin-IC protein.              31   7.5  
BC098392-1|AAH98392.1| 1108|Homo sapiens myosin IE protein.            31   7.5  

>U14391-1|AAA62667.1| 1109|Homo sapiens myosin-IC protein.
          Length = 1109

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 20/55 (36%), Positives = 28/55 (50%)
 Frame = +3

Query: 243 KAPXTAEGTEFKKRIPEALRTKCAKCNPKQRHLIRTVVKAFQTKLPDLWEELAIK 407
           K   T  G++ KK+  + + T   KC P   H IR + K  +TK P  WEE  +K
Sbjct: 555 KGRPTTAGSKIKKQANDLVST-LMKCTP---HYIRCI-KPNETKKPRDWEESRVK 604


>BC098392-1|AAH98392.1| 1108|Homo sapiens myosin IE protein.
          Length = 1108

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 20/55 (36%), Positives = 28/55 (50%)
 Frame = +3

Query: 243 KAPXTAEGTEFKKRIPEALRTKCAKCNPKQRHLIRTVVKAFQTKLPDLWEELAIK 407
           K   T  G++ KK+  + + T   KC P   H IR + K  +TK P  WEE  +K
Sbjct: 555 KGRPTTAGSKIKKQANDLVST-LMKCTP---HYIRCI-KPNETKKPRDWEESRVK 604


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,578,040
Number of Sequences: 237096
Number of extensions: 2025047
Number of successful extensions: 8768
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8767
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)