Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_O01
         (900 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0046 - 331758-332627                                             29   5.0  
12_02_0299 - 17051570-17052474,17053542-17053755                       29   6.7  
01_07_0106 - 41107673-41107942,41108362-41108574,41108877-411090...    29   6.7  
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350...    29   6.7  

>01_01_0046 - 331758-332627
          Length = 289

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 17/49 (34%), Positives = 19/49 (38%)
 Frame = +2

Query: 674 PPTGL*RYQAFPPESSLXRSPVPTLPXTRIPVRLSPLRETXXPFSXPPA 820
           PP    RY+  PP     R P PT+P  R    L P          PPA
Sbjct: 30  PPPSSSRYR--PPSPPSSRHPHPTIPAARAAPPLGPTNRRLHQQPPPPA 76


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 18/63 (28%), Positives = 23/63 (36%)
 Frame = +2

Query: 707 PPESSLXRSPVPTLPXTRIPVRLSPLRETXXPFSXPPAVGIPLXV*VVRXXPGPXXPNPP 886
           PP       P+P L     P    P      P++ PPA   P  +  +   P P  P PP
Sbjct: 237 PPFLPFPLPPIPFLTPPSPPPPAFPFPLPPWPWAPPPAFPFP-HLPPIFSPPSPPPPPPP 295

Query: 887 FXP 895
             P
Sbjct: 296 AFP 298


>01_07_0106 -
           41107673-41107942,41108362-41108574,41108877-41109041,
           41109431-41109649,41110205-41110324,41110427-41110489,
           41111034-41111606,41111691-41111858,41112414-41112495,
           41112667-41112743,41113031-41113101,41114315-41114363
          Length = 689

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
 Frame = +2

Query: 734 PVPTLPXTR-IPVRLSPLRETXXPFSXPPAVGIPLXV*VVRXXPGPXXPNP 883
           PV   P  R +PV +SP+RET      P  V       ++R  P P    P
Sbjct: 228 PVKEAPILREVPVHISPVRETSFLREVPAPVSPVKETPILREVPTPLKETP 278


>01_07_0021 -
           40533864-40534583,40534779-40534814,40534909-40535048,
           40535837-40535922,40536430-40536653,40536770-40536865,
           40538766-40538833,40539945-40540055,40540799-40540955
          Length = 545

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +2

Query: 707 PPESSLXRSPVPTLPXTRIPVRLSPLRETXXPFSXPPAVGIPLXV*VVRXXPG-PXXPNP 883
           PP ++    P+P+ P   +PV   P+  T  P++  P V  P+   +V   P  P  PN 
Sbjct: 459 PPPTTGSFMPIPSAPFAGLPVPAGPM--TAVPYNSYP-VFPPMNYPMVNIPPPFPSAPNT 515

Query: 884 P 886
           P
Sbjct: 516 P 516


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,439,361
Number of Sequences: 37544
Number of extensions: 317546
Number of successful extensions: 694
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)