Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_O01
         (900 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC034809-1|AAH34809.1|  249|Homo sapiens family with sequence si...    32   3.3  
AK056918-1|BAB71310.1|  126|Homo sapiens protein ( Homo sapiens ...    32   3.3  
AF508785-1|AAM34265.1|  880|Homo sapiens GAS2-related protein is...    30   10.0 
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.     30   10.0 

>BC034809-1|AAH34809.1|  249|Homo sapiens family with sequence
           similarity 109, member A protein.
          Length = 249

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
 Frame = +2

Query: 707 PPESSLXRSPVPTLPXTRIPVRLSPLRETXXPFSXPPAV-GIPLXV*VVRXXPGPXXPNP 883
           PP      +PVP+LP    PV   PL     P + PP   G  +        PGP  P P
Sbjct: 149 PPSLPSALAPVPSLPSAPAPVPALPL--PRRPSALPPKENGCAVWSTEATFRPGPEPPPP 206

Query: 884 P 886
           P
Sbjct: 207 P 207


>AK056918-1|BAB71310.1|  126|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32356 fis, clone PROST2007974, weakly similar to
           ANTER-SPECIFIC PROLINE-RICH PROTEIN APG. ).
          Length = 126

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
 Frame = +2

Query: 707 PPESSLXRSPVPTLPXTRIPVRLSPLRETXXPFSXPPAV-GIPLXV*VVRXXPGPXXPNP 883
           PP      +PVP+LP    PV   PL     P + PP   G  +        PGP  P P
Sbjct: 26  PPSLPSALAPVPSLPSAPAPVPALPL--PRRPSALPPKENGCAVWSTEATFRPGPEPPPP 83

Query: 884 P 886
           P
Sbjct: 84  P 84


>AF508785-1|AAM34265.1|  880|Homo sapiens GAS2-related protein
           isoform beta protein.
          Length = 880

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 18/42 (42%), Positives = 21/42 (50%)
 Frame = +2

Query: 695 YQAFPPESSLXRSPVPTLPXTRIPVRLSPLRETXXPFSXPPA 820
           +Q   PES   RSP P    T+IP+RL P R      S P A
Sbjct: 483 FQFREPES--VRSPTPVQGLTKIPIRLPPARPPTPGRSFPGA 522


>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
          Length = 1134

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 25/76 (32%), Positives = 27/76 (35%)
 Frame = +2

Query: 668  GXPPTGL*RYQAFPPESSLXRSPVPTLPXTRIPVRLSPLRETXXPFSXPPAVGIPLXV*V 847
            G PP    R  A P E+     P P  P   +P    PL     P   PP    PL    
Sbjct: 939  GLPPP---RAPALPSEARAPPPPPPPPPHPPLPP--PPLPPPPLPLRLPPLPPPPLP--- 990

Query: 848  VRXXPGPXXPNPPFXP 895
             R  P P  P PP  P
Sbjct: 991  -RPHPPPPPPLPPLLP 1005


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,562,459
Number of Sequences: 237096
Number of extensions: 1580552
Number of successful extensions: 2631
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2630
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)