Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_N23
         (915 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0636 + 20168180-20168462,20168961-20170303,20170401-201706...    31   1.7  
08_02_0725 - 20442988-20443180,20443268-20443540,20443642-204438...    30   2.2  
07_03_1175 - 24555965-24556117,24557809-24558264,24558270-245584...    29   3.9  
10_08_0121 + 14977645-14977734,14978975-14979062,14979271-14979617     29   6.8  
09_04_0734 + 19796297-19796329,19796866-19797129                       29   6.8  
07_01_0077 + 566895-567127,567207-567331,571204-571340,571437-57...    29   6.8  
06_03_1506 + 30641428-30642168                                         29   6.8  
09_02_0302 - 7086017-7086124,7086125-7086796,7087511-7088070,708...    28   9.0  
06_02_0125 + 12122812-12122911,12123647-12123993                       28   9.0  
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332...    28   9.0  

>07_03_0636 +
           20168180-20168462,20168961-20170303,20170401-20170678,
           20170790-20170821,20170908-20171314,20171401-20171847
          Length = 929

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = +3

Query: 138 SFYASWLRREVSDHQPIFKVSPTPSRYSRLCHLGQGNGGREGLRD 272
           SF  S+L +E++  +       +PS Y+R   LG GNGG + + D
Sbjct: 708 SFARSYLVQELNIAETRLVPLNSPSDYARALELGSGNGGVDAIID 752


>08_02_0725 -
           20442988-20443180,20443268-20443540,20443642-20443853,
           20443935-20444247,20444334-20444441,20444537-20444643,
           20444743-20444781
          Length = 414

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -1

Query: 312 TTFTKKSLVALSQSPEDLPSPHFPVPSDKVV 220
           TTF +++  A S +PE+LP P   +  D+VV
Sbjct: 233 TTFRRRTTAAASPAPEELPLPRKILDHDRVV 263


>07_03_1175 -
           24555965-24556117,24557809-24558264,24558270-24558436,
           24558468-24558756,24559620-24559726,24559841-24559909,
           24560001-24560109
          Length = 449

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = +1

Query: 271 TLGESDQGLFGKGGYNREFFNDDRGKLTGQAYGTRVLGXGGDSTSYGG 414
           T  +   G+ G GG+    +    G  +G  YGT   G GG     GG
Sbjct: 106 TANDRAGGIRGGGGFGAGGYGSGGGYSSGGGYGTGEYGRGGGYAGNGG 153


>10_08_0121 + 14977645-14977734,14978975-14979062,14979271-14979617
          Length = 174

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -3

Query: 514 HTPEADASIPALPPICLXQVNSSPW-RSHWPS 422
           H P ADA +P + P  L   NS  W + HW S
Sbjct: 90  HPPCADAPLPPIGPSTLLPSNSLWWSQHHWES 121


>09_04_0734 + 19796297-19796329,19796866-19797129
          Length = 98

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
 Frame = +1

Query: 238 DREMGGGKVFGTLGESDQGLFGKGGYNREFFNDDRGKLTGQAYGTRVLG-XGGDST 402
           + E GGG  FG  GE   G  G G     +       LTG   G  V G   GD+T
Sbjct: 35  EEECGGGVSFGAAGEDGHGGDGDGDGVNAYLRFPGPTLTGSGDGGVVGGEVDGDAT 90


>07_01_0077 +
           566895-567127,567207-567331,571204-571340,571437-571542,
           571635-571885,572018-572128,572209-572320,572626-572716,
           573168-573507,573678-573900,573946-574204,574274-574481,
           574572-574622,574712-574870,574956-575120,575322-575399,
           575732-576031,576107-576259,576871-576918,577019-577188,
           577738-577852,578462-578623,578789-578893,578969-579199,
           579277-579410,579484-579738,579822-580110,580214-580306,
           580395-580520,580646-580897
          Length = 1693

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +3

Query: 150 SWLRREVSDHQP-IFKVSPTPSRYSRLCHLGQGNGGREGLRDFGRERP 290
           SWL REV  H P  F + P P   S+    GQ N  +E  + F    P
Sbjct: 94  SWLWREVLKHNPDAFTIKPRPLPPSQDPLEGQENQNQEHEKHFAHVAP 141


>06_03_1506 + 30641428-30642168
          Length = 246

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = +1

Query: 250 GGGKVFGTLGESDQGLFGKG-GYNREFFNDDRGKLTGQAYGTRVLGXGGDSTSYGG 414
           GGG  +G+ G    G +G+G GY         G   G   G+   G GG  + YGG
Sbjct: 73  GGGGGYGSGGGEGNGAYGQGYGYGSGNGGGGGGGYGGGGGGS--YGSGGMGSGYGG 126


>09_02_0302 -
           7086017-7086124,7086125-7086796,7087511-7088070,
           7088754-7089131,7089357-7089821,7090022-7090127,
           7090219-7090294,7090407-7090648,7090824-7090904,
           7091013-7091205,7091336-7091558,7091611-7091646,
           7091694-7091790
          Length = 1078

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 549 RQXTSEXSYQDPTRRKXMLRSQRCH 475
           R+ TSE   QDP +R   +R + CH
Sbjct: 239 RRDTSEGGDQDPVKRHEKIRKEVCH 263


>06_02_0125 + 12122812-12122911,12123647-12123993
          Length = 148

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 20/55 (36%), Positives = 21/55 (38%)
 Frame = +1

Query: 250 GGGKVFGTLGESDQGLFGKGGYNREFFNDDRGKLTGQAYGTRVLGXGGDSTSYGG 414
           GGG   G  G    G    GGY    +    G   GQ YG    G  G S  YGG
Sbjct: 64  GGGYGGGGYGHPGYGGGYGGGYGHPGYGGGYGGGYGQGYGCG-YGHPGHSGGYGG 117


>01_01_0446 +
           3321832-3322232,3322398-3322455,3322810-3323748,
           3324504-3324654,3324740-3324818,3325826-3325934
          Length = 578

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = +1

Query: 253 GGKVFGTLGESDQGLFGKGGYNREFFNDDRGKLTGQAYGTRVLGXG--GDSTSY 408
           GG+  GT G    G + +GG +   F+D RG   G  YG R  G    GD + Y
Sbjct: 244 GGRGGGTGGGGRGGGYNRGGGDDRGFDDHRGGRGG--YGGRDQGNNQRGDESGY 295


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,725,081
Number of Sequences: 37544
Number of extensions: 378488
Number of successful extensions: 1207
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)